Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02607 ATGTCAAAAAAACTCATACTCATTTCCATCTTTAAATTTCTTAGCATCATCACCCTTTTCACAAAATCAATTGCACAATCACCAAATTATGTAGGTGATGATTGTCACAATTCAACAAAACAATCACTTACAACTACATACAAATCCAACCTTAATAAAGTCCTTTCATTGCTCTCATCTGATGCTATTGTAAGTAAAGGATATAATCATACAAGTGTAGGTGACAATACAGTTGATGCTGTCTATGGTCTCTATGATTGTAGAGGTGATGTCACAGGATCATTTTGTCAATTTTGTGTCTCTACTGCTGCCTCAGATATTCTTCAGCACTGTCCTAATAGAGCTTCAGCTGTTATATGGTACAACTTTTGCATTCTCAGGTATTCCAACCATAATTTCTTTGGGAACCTCACAATAAGTCCATCATGGCAAATGTTGGGAACAAAAAACATCACTAATCCACAAGAACTTGATAAAGGTGAGGATAATATGCAAAGTTTAATAAGTGAAGCTACTTTGGAGACCAATAAGTTGTATGGAATGAGGGAGTTCACTTTGAGTCCTACTGAAAAAAGATATGGATTGGTGCAGTGTAGTAGGGACCTTAGTGACAAGCAATGTAATCAATGTTTGGAGGCTATGTTAGACAAAGTTCCTAAATGCTGTGGGACAAAGATTGGTTGGCAAGTTGTTGCTCCAAGTTGTTTGATAAAGTATGATGATTTTATGTTCTACAAGCTTATTTTTCAAACTTCTCCTCCTTTGCCTAATTCAGCACTTGCAGCAGGGCAAGGAAGATCAAGTAAATCAAATATCTTGATCAAAATTATTGTCGTTGTGTTGGTGGTTGCCCTTGTTCTCATAAGTTGTTGTATCTTCGTCGTATGGAGGCGGAAACATTCAAATAAAGATGGATTACCATCAAAGACAATTCCTATATCTCAGCATGGCCATACTCAAGGAGATGATTCATATAATGCTGACCTCCCAATAATCCCTTTAATTTGGATTCGACAAAGCACTAATAACTTTTCAGAATTATGTAAACTAGGAGAAGGTGGATTTGGTCCTGTATACAAGGGTAATTTAGTAGATGGAACAGAAGTTGCAATCAAAAGGCTCTCTATAACATCTGGTCAAGGTTCAGACGAGTTCAAGAATGAAGTAATCTTTATAGCTAAATTGCAACATAGAAACCTTGTGAGACTTTTGGGTTGTTGCATTGAGGATAATGAAAAGTTGCTTGTATATGAATACATGCCAAACTCGAGCCTCGACTTTCATCTATTTGATGATGAAAAAAGAAAACTTCTAGATTGGAAGTTAAGACTGAACATTATCAATGGAATTGCAAAAGGACTCTTATATCTTCATGAAGACTCTAGACTTAGAGTAATCCATAGAGACCTAAAAGCAAGTAATGTTCTTTTAGATCAAGAGATGAATCCAAAAATATCTGATTTTGGATTGGCAAGGGCATTTGAAAAAGGTCAAAGTCAAGAAAAGACAAGAAGAGTTGTGGGCACATATGGTTACATGGCTCCAGAATACGCGATGGAAGGGTTATATTCAGGGAAATCAGATGTTTTCAGCTATGGAGTTCTTTTATTAGAAATAATATGTGGAAAAAAGAATGGTGGATTCTATCTCGAAGAACATGGTCAAAGTCTTCTTATATATAGTTGGAATCTTTGGTGTGAAGGAAAAAGTTTGGAACTGTTAGATCCAATACTGAAAAATACATACATAAGCAATGAAGTTATGAAATGCATACACATTGGTTTGTTATGTGTACAAGAAGATGCAGTGGATAGACCAACCATGTGCAATGTTGTTGTCATGCTAGCAAGTGACACAATGGCACTTTCCAATCCTAAACATCCTGCATTTTCAGTTGGAAGACAAGTAACTGATGATCAATCAACATCTAAAGCTTCCAAAGATCCTTCTGTTAATGAAGTTACAATATCAAATATTTTTCCTAGGTAG 1989 0.357 MSKKLILISIFKFLSIITLFTKSIAQSPNYVGDDCHNSTKQSLTTTYKSNLNKVLSLLSSDAIVSKGYNHTSVGDNTVDAVYGLYDCRGDVTGSFCQFCVSTAASDILQHCPNRASAVIWYNFCILRYSNHNFFGNLTISPSWQMLGTKNITNPQELDKGEDNMQSLISEATLETNKLYGMREFTLSPTEKRYGLVQCSRDLSDKQCNQCLEAMLDKVPKCCGTKIGWQVVAPSCLIKYDDFMFYKLIFQTSPPLPNSALAAGQGRSSKSNILIKIIVVVLVVALVLISCCIFVVWRRKHSNKDGLPSKTIPISQHGHTQGDDSYNADLPIIPLIWIRQSTNNFSELCKLGEGGFGPVYKGNLVDGTEVAIKRLSITSGQGSDEFKNEVIFIAKLQHRNLVRLLGCCIEDNEKLLVYEYMPNSSLDFHLFDDEKRKLLDWKLRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFEKGQSQEKTRRVVGTYGYMAPEYAMEGLYSGKSDVFSYGVLLLEIICGKKNGGFYLEEHGQSLLIYSWNLWCEGKSLELLDPILKNTYISNEVMKCIHIGLLCVQEDAVDRPTMCNVVVMLASDTMALSNPKHPAFSVGRQVTDDQSTSKASKDPSVNEVTISNIFPR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02607 662 FunFam Liguleless narrow1 420 623 - -
Mepo5g02607 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mepo5g02607 662 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Mepo5g02607 662 ProSiteProfiles Protein kinase domain profile. 344 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02607 662 Pfam Protein tyrosine and serine/threonine kinase 348 613 IPR001245 GO:0004672|GO:0006468
Mepo5g02607 662 Gene3D - 141 244 IPR038408 -
Mepo5g02607 662 Gene3D - 29 133 IPR038408 -
Mepo5g02607 662 FunFam Cysteine-rich receptor-like protein kinase 28 31 132 - -
Mepo5g02607 662 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Mepo5g02607 662 Pfam Domain of unknown function (DUF3403) 617 662 IPR021820 GO:0004674
Mepo5g02607 662 SMART serkin_6 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02607 662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 309 419 - -
Mepo5g02607 662 Gene3D Phosphorylase Kinase; domain 1 312 419 - -
Mepo5g02607 662 MobiDBLite consensus disorder prediction 634 650 - -
Mepo5g02607 662 FunFam Cysteine-rich receptor-like protein kinase 10 142 244 - -
Mepo5g02607 662 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Mepo5g02607 662 Pfam Salt stress response/antifungal 162 240 IPR002902 -
Mepo5g02607 662 MobiDBLite consensus disorder prediction 631 650 - -
Mepo5g02607 662 SUPERFAMILY Protein kinase-like (PK-like) 325 615 IPR011009 -
Mepo5g02607 662 CDD STKc_IRAK 350 615 - -
Mepo5g02607 662 Gene3D Transferase(Phosphotransferase) domain 1 420 628 - -
Mepo5g02607 662 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 44 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02607 Mepo-Chr5 31612643 31632778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02607 7 662 Receptor kinase-like Gene Family AT4G05200 41.228 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo5g02607 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02607 - - mtr:25490357 1060.44