Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02603 ATGATGGTTTTCTTTTCTGAAGCAACAAGGCAAGAACCAGACAGTGTTTGGGAAAAAGTAGTAGATAGTGCTTTTGGGTCATATACTCCATGTGCAATCAATACTCTTGTTATCTCAACCTCAAATTTAGTTCTTATGGGGCTGTGTTTATATAGAATATGGCTTATTATTTTCAATGCCAAAGCTCAAAGGTTTTGTTTGAAATCAAATTACTATAATTATATTCTTGCAATGTTGGCTAGTTATTGTGCTTTTCAGCCTTTGTTGAGATTGTGGACTGGAAATTCAGCCTTCAATCTGAATGAGGAGACTGATTTTGCCCCTTTTGAGATAACAGGTCTGGTCATTGAATCACTTACATGGTTCTCAATGATAATTCTCATCCTCTTGGAAACCAAGGTTTATATTAGGCAGTTTAGGTGGTTGGTGAGGTTTGGAGTTATTTATGTTTTGGTGGGAGATATTGTAATGCTTGAGCTTGTTATGTCAGTGAAAGATTACTCTAGCAGATCTGCCCTATATCTGTCTATTAGCACTGTCACCTGTCAGGTGTTGTTTGGTATCTTACTTCTAGTTTACATTCCTAATTTGGTTCCATATTCTGGCCTTACAACAATGCATGCTGAGGTACCTGACAATGGTGAATATGAACCACTTTGTGGAGATGATCAAGTTTGCCCTGAGATGCGCGCCAGTTTATTATCTAGATTAAGTTTTGGATGGATAACTCCACTCATGAAACAAGGCTACAGAAAACCAATCACTGAAAAGGATGTTTGGAAGCTAGACAAATGGGACCAAACAGACACATTGAGTGAAAAGTTCCAAAAGTGTTGGATGTCAGAATTTCAAAGCTCTAACCCTTGGCTTTTAAGAGCATTAAACAATAGCTTAGGGAAAAGGTTTTGGTTTGGAGGCATTTATAAGATTGGTTATGATCTTTCTCAATTGGTTGCGCCGATTTTGCTGAACCATCTCTTAGATTCAATGCAAAATGGAGATCCGTCTTGGATTGGTTATGTCTGTGCCTTCTCAATATTTGTTGGAGTGTCAGTTGGTATTATATGTGAGACACAATATTTCCAGAATGTTATGCGTGTCGGTTTTCGACTTAGATCAACATTGGTGGCTGCTATATTTAGAAAGTCTTTGAGGCTAACTCATGAAAGTAGAAAGAAGTTCTCATACGGGAAGCTTATGAATATGATAGCAACAGATGCCAATGCATTACAGCAAATATGTCAACAACTTCATGGACTATGGTCAGCACCATTTCGCATCAGCATAGCTATGGTTCTCCTATACCAGCAACTAGGTGTTGCCTCACTTGTTGGCTCACTAATGCTAGTTCTCATTATTCCATTACAGGCAAGTTTTGATATCTCACAGGCACATCAGACATTTGTGATTGGCAAAATGAAAAAATTGACAAAGGAAGGACTGCAACAGACAGACAAAAGGGTTGGTCTGACGAATGAAATTCTTTCTACTATGGATACAGTAAAATGTTATGCATGGGAAACAAGCTTTCAGTCTAGAATTCAAAGCATTCGACATGAAGAACTTTCATGGTTTCGCAAAGCATATCTTCTCTATGCTTTGAACAGTTTTATATTGAACAGCATTCCAGTTCTTGTGACAGTAACTTCCTTTGGAATGTTTACTTTACTTGGTGGAGAATTAACACCTGCAAGAGCATTCACCTCACTATCTCTGTTTACCGTTTTGCGCTCTCCTTTAAATAGTCTTCCAAATTTACTAAATCAGGTAGCAAATGCAAATGTGTCATTGCAACGTTTGGAGGAACTGTTTTTGGCCGAGGAACGGAATTTAAAACAAAATCCACCAATTGTTCCAGGACTTCCAGCCATCTCAATAAAGAATGGATACTTTTCATGGGATCCTAAGGAAGAAAAGCCCACATTATCAAATATCAATGTTGAAATACCAGTTGGAAGCTTAGTTGCAATCATTGGAGGTACTGGAGAAGGGAAAACATCTCTTATTTCAGCAATGCTTGGAGAGATACCTCTTGTATCCGATGGAAATTCTACAATCAGAGGCGCTGTTGCTTATGTTCCGCAGATTTCGTGGATTTATAATGCTACAGTTCGTGACAATATATTATTCGGTTCAAATTTCGACCATGGACGATATTCGAAGGCTATCGATGTCACTTCTTTGGAGCATGATCTCAACTTTTTACCTGGCCGCGATTTTACAGAGATTGGAGAAAGAGGAATCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCTTTAGCTAGGGCTGTATATTCAAATTCAGATGTATATATATTTGATGATCCTTTAAGTGCTCTTGATGCTCATATTGCTCAAGAGGTTTTCAGGAACTGTATAAAGGAAGGGCTGCAAGAAAAAACCAGGGTTCTTGTCACCAACCAGCTTCATTTTCTTCCTCAGGTGGATAAAATTATTCTTGTTAGTGAAGGCATGATTAAGGAGCAAGGAACGTTCGAGGAGTTGTCGAAATGTGGGCCTCTATTTCAGAAACTAATGGAAAATGCCGGGAAAATGGAACAAGAAGTAGATAGTCATGACAAGAATGATGTTTTTCCTTTGGATAATGGGGCAATTGTAGAGTTGCCAAATGATTTAAGCTATGGGAAGAAGGGAAAATTTCAAAAATCAGTACTTGTTAAGCAAGAAGAGCGGGAGACAGGCGTGGTTAGCTGGAAAGTTTTAATGAGGTATACATCTGCTTTGGGAGGACTGTGGGTAGTTTCTATACTTCTTGCATGCTACACAATAACAGAAGCTCTTCGAATTTCGAGTAGTACATGGTTAAGTGTGTGGACATCTCAAGACTCAAATGCAGCTTCTCGTGCCGGATATTTTCTTTTCATCTATGCAATATTCTCATTCGGACAGGTATCTGTGGCACTTGCAAACTCTTATTGGTTGATCATTTCAAGTCTTCGTGCTGCAAAACGATTGCACGATGCAATGCTAGATAAAGTTCTACGCGCTCCAATGATATTCTTCCAGACTAATCCTGTCGGCCGCATAATTAATAGATTTGCAAAAGACACTGGGGACATAGATTCCAGTGTTTATAATTTGGTGAATACTGTTCTAGGACAACTATGGCAACTACTTTCAACATTTGTTCTTATAGGCACTGTCAGCACCATATCCCTGTGGGCCATAATGCCACTTCTGATATTTTTCTATGTTGCTTATATATACTACCAGAGCACATCTCGAGAAGTGAAGCGCATGGATTCCATTACAAGATCGCCAGTTTATGCACATTTTGGAGAATCATTGAACGGTTTGTCAAGCATTCGTGCTTACAAGGCGTATGACAAGATGTCACACAACAACGGAAAATTCATGGATAACAATATCAGATTTACTCTTGCGAATATTAGTACCAACCGTTGGTTAACCATACGGTTAGAAAGTTTAGGAGGCCTCATGATTTGGTTGATAGCAACATTTGCTGTGTTACAAAATGCAGGATCTGAAAACCCTACAATGGTTGCATCTACAATGGGTCTACTTCTCAGTTACACATTGAACATAACAAGTATTTTGAGCAGCACACTTAGACAAGCAAGTCGAGCTGAAAACAGTTTAAATTCGGTCGAGCGCGTTGGAACATATATAGATTTAGAAGCTGAGGGTCAAAATATAATTGAGACGAACCGTCCACCACCAGGATGGCCAACAAAAGGATCAATTGAGTTTGAGAATGTTGTTTTGAGATATAGGCCGGAACTTCCTCCGGTCTTGCATGGATTGTCCTTTGTAGTGTCTTCAATGGAGAAGATAGGTGTAGTTGGAAGAACTGGTGCAGGAAAGTCTAGCATGCTTAATGCGTTATTTCGGATTGTGGAGCTACAAAGTGGAAGAATCATTATTGATGGATGTGATATTTCTACGTTCGGATTAGCAGACTTGAGAAGAGTTCTTACTATCATACCACAGTCGCCCGTTCTTTTCTCCGGAACTGTTCGTTTCAATCTTGATCCATTTAATGAATACAATGATGCTGACATATGGGAAGCTTTGGAAAGGGCACACATGAAGGATGTAATAAGAAGAAATCAATTTGGTCTAGATGCTCAGGTTTCTGAAGGAGGAGACAATTTCAGTGTTGGACAAAGGCAGCTATTAAGTTTAGCTAGAGCATTGCTAAGAAGATCAAAGGTTCTTGTCCTCGATGAAGCTACTGCTTCGGTAGATGTTAGAACTGATGCACTTATACAGAAAACTATCAGACAAGAATTCAATTCCTGCACAATGCTCATTATTGCGCATAGATTGAATACTGTTGTCGACTGCAACCGGATTCTGTTGCTCGATGCTGGAAAGGTTCTTGAATACAATTCACCTAAGGAACTCTTACAAAATGAAGAAACTGCATTCTACAAAATGGTTCAAAGTACCGGTCCTGCAAATGCTGAGTATTTATGTAGCTTAGTATTTGGAAGGAAAGAGAACAATTCAAATGAACAATTCAAAGGAAAGAGAACAATTCAAATGAACAATTCAAGGAGGCGGAAAACCGTATGA 4560 0.389 MMVFFSEATRQEPDSVWEKVVDSAFGSYTPCAINTLVISTSNLVLMGLCLYRIWLIIFNAKAQRFCLKSNYYNYILAMLASYCAFQPLLRLWTGNSAFNLNEETDFAPFEITGLVIESLTWFSMIILILLETKVYIRQFRWLVRFGVIYVLVGDIVMLELVMSVKDYSSRSALYLSISTVTCQVLFGILLLVYIPNLVPYSGLTTMHAEVPDNGEYEPLCGDDQVCPEMRASLLSRLSFGWITPLMKQGYRKPITEKDVWKLDKWDQTDTLSEKFQKCWMSEFQSSNPWLLRALNNSLGKRFWFGGIYKIGYDLSQLVAPILLNHLLDSMQNGDPSWIGYVCAFSIFVGVSVGIICETQYFQNVMRVGFRLRSTLVAAIFRKSLRLTHESRKKFSYGKLMNMIATDANALQQICQQLHGLWSAPFRISIAMVLLYQQLGVASLVGSLMLVLIIPLQASFDISQAHQTFVIGKMKKLTKEGLQQTDKRVGLTNEILSTMDTVKCYAWETSFQSRIQSIRHEELSWFRKAYLLYALNSFILNSIPVLVTVTSFGMFTLLGGELTPARAFTSLSLFTVLRSPLNSLPNLLNQVANANVSLQRLEELFLAEERNLKQNPPIVPGLPAISIKNGYFSWDPKEEKPTLSNINVEIPVGSLVAIIGGTGEGKTSLISAMLGEIPLVSDGNSTIRGAVAYVPQISWIYNATVRDNILFGSNFDHGRYSKAIDVTSLEHDLNFLPGRDFTEIGERGINISGGQKQRVSLARAVYSNSDVYIFDDPLSALDAHIAQEVFRNCIKEGLQEKTRVLVTNQLHFLPQVDKIILVSEGMIKEQGTFEELSKCGPLFQKLMENAGKMEQEVDSHDKNDVFPLDNGAIVELPNDLSYGKKGKFQKSVLVKQEERETGVVSWKVLMRYTSALGGLWVVSILLACYTITEALRISSSTWLSVWTSQDSNAASRAGYFLFIYAIFSFGQVSVALANSYWLIISSLRAAKRLHDAMLDKVLRAPMIFFQTNPVGRIINRFAKDTGDIDSSVYNLVNTVLGQLWQLLSTFVLIGTVSTISLWAIMPLLIFFYVAYIYYQSTSREVKRMDSITRSPVYAHFGESLNGLSSIRAYKAYDKMSHNNGKFMDNNIRFTLANISTNRWLTIRLESLGGLMIWLIATFAVLQNAGSENPTMVASTMGLLLSYTLNITSILSSTLRQASRAENSLNSVERVGTYIDLEAEGQNIIETNRPPPGWPTKGSIEFENVVLRYRPELPPVLHGLSFVVSSMEKIGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGCDISTFGLADLRRVLTIIPQSPVLFSGTVRFNLDPFNEYNDADIWEALERAHMKDVIRRNQFGLDAQVSEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATASVDVRTDALIQKTIRQEFNSCTMLIIAHRLNTVVDCNRILLLDAGKVLEYNSPKELLQNEETAFYKMVQSTGPANAEYLCSLVFGRKENNSNEQFKGKRTIQMNNSRRRKTV 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02603 1519 Gene3D ABC transporter type 1, transmembrane domain 884 1223 IPR036640 GO:0005524|GO:0016020
Mepo5g02603 1519 Gene3D ABC transporter type 1, transmembrane domain 281 607 IPR036640 GO:0005524|GO:0016020
Mepo5g02603 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1232 1475 IPR027417 -
Mepo5g02603 1519 Pfam ABC transporter 1259 1407 IPR003439 GO:0005524
Mepo5g02603 1519 Gene3D - 1225 1478 IPR027417 -
Mepo5g02603 1519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 923 1205 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g02603 1519 FunFam Multidrug resistance-associated protein member 4 1226 1478 - -
Mepo5g02603 1519 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Mepo5g02603 1519 CDD ABC_6TM_ABCC_D2 921 1217 IPR044726 GO:0140359
Mepo5g02603 1519 CDD ABCC_MRP_domain1 624 824 - -
Mepo5g02603 1519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1242 1476 IPR003439 GO:0005524
Mepo5g02603 1519 FunFam ABC transporter C family member 2 278 609 - -
Mepo5g02603 1519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 848 IPR003439 GO:0005524
Mepo5g02603 1519 Pfam ABC transporter transmembrane region 304 580 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g02603 1519 Pfam ABC transporter transmembrane region 923 1169 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g02603 1519 CDD ABC_6TM_ABCC_D1 304 600 IPR044746 GO:0140359
Mepo5g02603 1519 ProSitePatterns ABC transporters family signature. 1379 1393 IPR017871 GO:0005524|GO:0016887
Mepo5g02603 1519 SUPERFAMILY ABC transporter transmembrane region 288 600 IPR036640 GO:0005524|GO:0016020
Mepo5g02603 1519 FunFam ABC transporter C family member 2 885 1223 - -
Mepo5g02603 1519 Pfam ABC transporter 642 777 IPR003439 GO:0005524
Mepo5g02603 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 847 IPR027417 -
Mepo5g02603 1519 FunFam ABC transporter C family member 2 618 864 - -
Mepo5g02603 1519 SUPERFAMILY ABC transporter transmembrane region 920 1222 IPR036640 GO:0005524|GO:0016020
Mepo5g02603 1519 Gene3D - 608 866 IPR027417 -
Mepo5g02603 1519 Coils Coil 842 862 - -
Mepo5g02603 1519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 303 592 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g02603 1519 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 228 1482 - -
Mepo5g02603 1519 SMART AAA_5 651 831 IPR003593 GO:0016887
Mepo5g02603 1519 SMART AAA_5 1268 1447 IPR003593 GO:0016887
Mepo5g02603 1519 Coils Coil 583 603 - -
Mepo5g02603 1519 CDD ABCC_MRP_domain2 1240 1460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02603 Mepo-Chr5 31559740 31575144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02603 569 840 Calmodulin-binding Proteins AT2G36910 24.830 4.17e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02603 - K05665 vun:114175221 2493.38