Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02602 ATGGGTTTTGAACCATTGATTTGGTACTGCAAGCCAGAACCAGACAGTGTTTGGGAAAAAATAGTAGATAGTGCTTTTGGGTCATATACACCATGTGCAATCAACACTCTTGTTATCTCAACCTCAAATTTGGTTCTTATGGGGCTGTGTTTATATAGAATATGGCTTATTATTTTCAATGCTAAAGCTCAAAGGTTTTGTTTGAAATCAAATTACTATAATTATATTCTTGCAATGTTGGCTAGTTATTGTGCTTTTCAGCCTTTGTTGAGATTATGGACTGGAAATTCAGTCTTTAGCCTGAATGAGGAAGCTGATTTTGCTCCTTTTGAGATATTATCTCTGATCATTGAATCAGTTACTTGGTTCTCAATGATAATTCTAATCCTCTTGGAAACCAAGATTTATATTAGGCAATTTAGGTGGTTGGTGAGGTTTGGAGTTATTTATGTTTTGGTGGGAGATATTGTAATGTTTGACCTTCTTCTGTCAGTGAAAGATTACTCTAGCAGATCTTCCCTATATCTGTATATTAGCACTATTATCTGCCAGGTGTTGTTTGGTACCTTACTTTTAGTTTACATTCCTAATTTGGTTCCATATTCTGGTCAAACAACATTCCAAGCTGACATACCTGACAACGGTGAATATGAACCACTTTGTGGAGATGATCAAGTTTGCCCAGAGATGCGCGCCAATTTCTTATCCAGATTAAGTTATGGATGGATAACTCCACTCATGAAACAAGGCTACCGAAAACCTATCACTGAAAAGGATGTTTGGAAGCTCGACAAATGGGACCAAACAGAAACGTTAAATGAAAACTTCCAGAAGTGCTGGACATCAGAATTTCAAAGCTCTAACCCTTGGCTTTTAAGAGCATTAAACAGTAGTCTAGGGAAAAGGTTTTGGTTTGGAGGCATCTTTAAGATTGGTAATGATCTTTCTCAATTTGTGGGGCCTATTTTGCTGAATCATCTCTTAGATTCAATGCAAAATGGAGATCCGTCTTGGATCGGTTACATCTATGCCTTCTCCATATTTGTTGGAGTGTCAGTTGGTGTTCTATGTGAGGCACAATATTTCCAGAATGTTATGCGTGTTGGTTTTCGGCTTAGATCAACACTGGTGGCTGCTATATTCAGAAAATCTTTGAGGCTAACTCATGAAAGTAGAAAGAAGTTCTCAATGGGGAAGCTTATGAATATGATAACAACCGATGCCAATGCATTACAGCAAATATGTCAACAACTTCATGGACTATGGTCAGCACCATTCCGAATCATCATAGCTATGGTTCTCCTATACCAGCAACTAGGTGTTGCTTCACTTATTGGATCACTATTGCTAGTTCTCATTATTCCACTGCAGGCATGTTTTGATATCTCGCAAACACATACATTTGTGATTAGCAAAATGAGAAAACTGACAAAGGAAGGACTGCAACAGACAGACAAAAGGGTTGGTCTGATGAATGAAATTCTTTCTGCCATGGATACAGTAAAATGTTATGCATGGGAAACAAGCTTTCAGTCTAGAATTCAAACCATTCGACATGACGAACTATCATGGTTCCGCAAAGCACAACTTCTATATGCTCTTAATAGTTTTATACTGAACAGCATCCCAGTTCTTGTGACAGTAACTTCCTTTGGAGTGTTTACTTTACTTGGTGGAGAATTAACACCTGCAAGAGCATTCACCTCATTATCACTGTTTTCGGTTTTGCGCTTTCCTTTAAATATGCTTCCAAATTTACTAAGTCAGGTAGCAAATGCAAATGTCTCATTGCAACGTTTGGAGGAACTGTTTTCAGCCGAGGAACGAAATTTACAACAGAATCCACCTATTGTTCCAGGACTTCCCGCCATCTCAATAAAGAATGGATTCTTTTCATGGGATCCTAAGGAAGAGAAGGCCACATTATCAAATATCAATGTTGAAATACCAGTTGGAAGCTTAGTGGCAATCATTGGAGGTACTGGAGAAGGGAAAACATCACTTATTTCAGCAATGCTTGGAGAGCTACCTCTTGTATCTGATGGAAATGCTACAATCAGAGGCACTGTTGCTTATGTTCCACAGATTTCTTGGATTTACAATGCTACGGTTCGTGAAAATATATTATTTGGTTCTAAATTTGACCATGGACGGTATTCGAAGGCTATCGATGTCACTTCTTTGGAGCATGATCTCAACTTTTTACCTGGACGAGATTTTACGGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCTTTAGCTAGGGCTGTCTATTCAAATTCAGATGTATATATATTTGATGATCCTTTGAGTGCTCTTGATGCTCATATTGCTCAAGAGGTTTTCAAGAACTGTATAAAGGAAGGGCTGCAAGGGAAAACCAGAGTTCTTGTCACCAACCAGCTTCATTTTCTCCCTCAGGTGGATAAAATCATTCTTGTTAGTGAAGGAATGATTAAGGAGCAAGGAACGTTCGAGGAGTTGTCGAAATGTGGGCCTCTATTTCAGAAACTAATGGAAAATGCAGGGAAAATGGAACAAGAAGTAGATAGTAACAAAGATAGTGATAGTCACGACAAGACTAATGTTACACCCTTGAATAATGAAGCAATTGTAGAGTTACCAAATGATGCAAGCTATGAGAAGAAGGGAAAATTGAGAAAATCGGTACTTGTTAAGAAAGAAGAGCGGGAGACTGGTGTGGTTAGCTGGAAAGTTCTAACGAGGTACACATCTGCTTTGGGAGGACTGTGGGTAGTTGCTATACTTTTTGCATGCTACACATTAACAGAAGCTCTTCGAATTTCAAGTAGTACATGGTTAAGTGTGTGGACATCTCAAGATTCAACTGCAGCTTCTCAAGCAGGCTATTTTCTTTTCATCTATGCAATGTTCTCATTTGGACAGGTATCCGTGGCACTTGCAAACTCTTATTGGTTGATCATTTCAAGTCTTCGTGCTGCAAAACGATTGCACGATGCAATGCTAGATAAAATTTTGCATGCTCCAATGGTATTCTTCCAGACTAATCCTGTCGGCCGCATAATTAATAGATTTGCAAAAGACACGGGAGACATCGATACCAATGTTTTTAACTTGATGAATATGTTTCTGGGGCAAGTCTGGCAACTGCTTTCAACATTTGTTCTTATAGGCACTGTCAGCACCATTTCCCTGTGGGCCATAATGCCACTTCTGATATTTTTTTATGTTGCTTATATATACTACCAGAGCACGGCTCGAGAGGTGAAGCGCATGGATTCCATTACAAGATCTCCTGTTTATGCACATTTTGGAGAATCATTGAATGGTTTGTCGAGCATTCGCGCTTACAAAGTGTACGACAGGATGTCAAACATCAATGGAAAGTTCATGGATAACAATATCAGATTTACTCTTGTGAATATTAGTTCAAACCGTTGGCTAACCATAAGGTTAGAAAGCTTAGGTGGCCTCATGATTTGGTTGATAGCAACATTTGCTGTGTTACAAAATGCAAGATCTGAAAATCCTACAATGATTGCATCTACCATGGGTCTACTTCTTAGTTATACATTGAACATAACAAATCTCTTGAGTGGTGTACTTAGACAAGCAAGTAGAGCTGAAAACAGTTTGAATTCAGTCGAGCGCGTTGACACATATATAAATTTAGAAACCGAGGGTCAAAGTATAATTGAGACGAACCGTCCACCACCAGGATGGCCAACAAAAGGATCAATTGAGTTTGAGAATGTTGTTCTTAGTTATAGGCCGGAACTTCCTCCGGTCTTGCATGGATTGTCCTTTGTAGTGCCTTCAACTGAGAAGATAGGTGTAGTTGGAAGAACTGGTGCAGGAAAGTCTAGCATGCTTAATGCATTGTTCCGGATTGTGGAACTGCAAAGTGGAAGAATCATTATTGATGGTTGTGATATTTCTACATTCGGACTAGTAGATTTGCGAAGAGTTCTTACTATCATACCACAGTCGCCTGTTCTTTTCTCCGGAACTGTTCGTTTCAATCTCGATCCATTTAATGAACACAACGATGCTAACTTATGGGAAGCTTTGGAAAGGGCACACTTGAAAGATGTAATAAGAAGAAATTCTTTTGGTCTAGATGCTCAGGTTTCCGAAGGAGGAGACAATTTCAGTGTTGGACAAAGGCAGCTATTAAGTTTAGCTAGAGCATTGCTAAGAAGATCAAAGGTTCTTGTCCTTGATGAAGCTACTGCTGCTGTAGATGTTAGAACAGATGCTCTAATACAGAAAACCATCCGACAAGAATTTCATTCCTGCACAATGCTCATCATTGCACATAGATTGAATACAATTATCGACTGCAACCGAATTCTGTTGCTCGATGCTGGCAAGGTTCTTGAATACAATTCACCTGAGAAACTCTTACAAAATGAAGAAACCGCATTCTATAAAATGGTTCAAAGTACTGGTCCTGCAAATGCTGAGTATTTATGTAGCTTAGTATTTGGAAGGAAAGAGAACAATTCAAATGAATATAGCATGGAGTCGGAAAACCATACGAGACAGTTAGCATCTACAAATTGGGCTGCTGCTACTCAGTTTGCAATAGCTTCTACACTTTCTTCTTTACATCAACACCTTCAAAGTCCAAATAATGAAGACAATAAGGACATCCTTAATAGAACAAAGGATGCAGTAGTTACACTTCAGGAAGTTCTAGAAGGAAAGCATGATGAAACCATAGAAGAGACACTCACAAAGTATCATGTTCCTACAGATAGATGGTGGTCTACTCTCTATAAAGTTATTGAAGGTCTTGCTGTCTTGATCAGGTTACCTCAGGACAACAACTATAACCAATTAGAACCTGATTTTGAAGGGAGATCTTTTGACTAA 4881 0.3882 MGFEPLIWYCKPEPDSVWEKIVDSAFGSYTPCAINTLVISTSNLVLMGLCLYRIWLIIFNAKAQRFCLKSNYYNYILAMLASYCAFQPLLRLWTGNSVFSLNEEADFAPFEILSLIIESVTWFSMIILILLETKIYIRQFRWLVRFGVIYVLVGDIVMFDLLLSVKDYSSRSSLYLYISTIICQVLFGTLLLVYIPNLVPYSGQTTFQADIPDNGEYEPLCGDDQVCPEMRANFLSRLSYGWITPLMKQGYRKPITEKDVWKLDKWDQTETLNENFQKCWTSEFQSSNPWLLRALNSSLGKRFWFGGIFKIGNDLSQFVGPILLNHLLDSMQNGDPSWIGYIYAFSIFVGVSVGVLCEAQYFQNVMRVGFRLRSTLVAAIFRKSLRLTHESRKKFSMGKLMNMITTDANALQQICQQLHGLWSAPFRIIIAMVLLYQQLGVASLIGSLLLVLIIPLQACFDISQTHTFVISKMRKLTKEGLQQTDKRVGLMNEILSAMDTVKCYAWETSFQSRIQTIRHDELSWFRKAQLLYALNSFILNSIPVLVTVTSFGVFTLLGGELTPARAFTSLSLFSVLRFPLNMLPNLLSQVANANVSLQRLEELFSAEERNLQQNPPIVPGLPAISIKNGFFSWDPKEEKATLSNINVEIPVGSLVAIIGGTGEGKTSLISAMLGELPLVSDGNATIRGTVAYVPQISWIYNATVRENILFGSKFDHGRYSKAIDVTSLEHDLNFLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDAHIAQEVFKNCIKEGLQGKTRVLVTNQLHFLPQVDKIILVSEGMIKEQGTFEELSKCGPLFQKLMENAGKMEQEVDSNKDSDSHDKTNVTPLNNEAIVELPNDASYEKKGKLRKSVLVKKEERETGVVSWKVLTRYTSALGGLWVVAILFACYTLTEALRISSSTWLSVWTSQDSTAASQAGYFLFIYAMFSFGQVSVALANSYWLIISSLRAAKRLHDAMLDKILHAPMVFFQTNPVGRIINRFAKDTGDIDTNVFNLMNMFLGQVWQLLSTFVLIGTVSTISLWAIMPLLIFFYVAYIYYQSTAREVKRMDSITRSPVYAHFGESLNGLSSIRAYKVYDRMSNINGKFMDNNIRFTLVNISSNRWLTIRLESLGGLMIWLIATFAVLQNARSENPTMIASTMGLLLSYTLNITNLLSGVLRQASRAENSLNSVERVDTYINLETEGQSIIETNRPPPGWPTKGSIEFENVVLSYRPELPPVLHGLSFVVPSTEKIGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGCDISTFGLVDLRRVLTIIPQSPVLFSGTVRFNLDPFNEHNDANLWEALERAHLKDVIRRNSFGLDAQVSEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFHSCTMLIIAHRLNTIIDCNRILLLDAGKVLEYNSPEKLLQNEETAFYKMVQSTGPANAEYLCSLVFGRKENNSNEYSMESENHTRQLASTNWAAATQFAIASTLSSLHQHLQSPNNEDNKDILNRTKDAVVTLQEVLEGKHDETIEETLTKYHVPTDRWWSTLYKVIEGLAVLIRLPQDNNYNQLEPDFEGRSFD 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02602 1626 Pfam ABC transporter transmembrane region 928 1187 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g02602 1626 Pfam ABC transporter transmembrane region 304 580 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g02602 1626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1238 1481 IPR027417 -
Mepo5g02602 1626 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Mepo5g02602 1626 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1248 1482 IPR003439 GO:0005524
Mepo5g02602 1626 CDD ABCC_MRP_domain2 1246 1466 - -
Mepo5g02602 1626 FunFam Multidrug resistance-associated protein member 4 1232 1484 - -
Mepo5g02602 1626 ProSitePatterns ABC transporters family signature. 1385 1399 IPR017871 GO:0005524|GO:0016887
Mepo5g02602 1626 CDD ABCC_MRP_domain1 624 824 - -
Mepo5g02602 1626 SMART AAA_5 651 831 IPR003593 GO:0016887
Mepo5g02602 1626 SMART AAA_5 1274 1453 IPR003593 GO:0016887
Mepo5g02602 1626 FunFam ABC transporter C family member 2 891 1229 - -
Mepo5g02602 1626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 847 IPR027417 -
Mepo5g02602 1626 SUPERFAMILY ABC transporter transmembrane region 925 1228 IPR036640 GO:0005524|GO:0016020
Mepo5g02602 1626 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1488 - -
Mepo5g02602 1626 FunFam ABC transporter C family member 2 279 609 - -
Mepo5g02602 1626 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 928 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g02602 1626 Coils Coil 583 610 - -
Mepo5g02602 1626 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 592 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g02602 1626 Pfam ABC transporter 642 777 IPR003439 GO:0005524
Mepo5g02602 1626 CDD ABC_6TM_ABCC_D1 305 600 IPR044746 GO:0140359
Mepo5g02602 1626 Gene3D ABC transporter type 1, transmembrane domain 281 609 IPR036640 GO:0005524|GO:0016020
Mepo5g02602 1626 Gene3D ABC transporter type 1, transmembrane domain 889 1229 IPR036640 GO:0005524|GO:0016020
Mepo5g02602 1626 Gene3D - 622 856 IPR027417 -
Mepo5g02602 1626 FunFam ABC transporter C family member 2 618 864 - -
Mepo5g02602 1626 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Mepo5g02602 1626 Gene3D - 1231 1484 IPR027417 -
Mepo5g02602 1626 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 848 IPR003439 GO:0005524
Mepo5g02602 1626 SUPERFAMILY ABC transporter transmembrane region 289 608 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02602 Mepo-Chr5 31542117 31554488 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02602 569 840 Calmodulin-binding Proteins AT2G36910 25.685 6.76e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02602 - K05665 vun:114175221 2749.54