Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02596 ATGTCTCTCACTCATCATAATAACCATGAAGAACATCATGAAATAGTTGAACAAACATCAGAGAATTCTGTTTGTCCAATGTGTTACAACAAGAGACCAAAACTTGATTGGACAAGAAGAGACTTCACATATGCTGAATTGCATACAGCAACACAAGGATTTTCTGCAAAGAACTTTCTGTCAGAAGGTGGATTTGGTTCTGTCTACAAAGGAGAGATTCTTGGATACAAGATTGCTGTTAAACAATGTATTCATGCAAGTCACAAACAAGAGAAGGAGTTTAAGTCTGAAGTTGATGCATTAGGCAAAGCAAGACATGAAAATATTGTCATGTTGCTTGGATCATGTTCTGAAGGAAACCATAGGCTTCTTGCTTATGAATATGTCTGCAATGGTTCACTAGATCAACATTTATCACAATACTCTCGTAAACCTCTATGCTGGCAAGATAGGGTGAAAGTAGCTACGGGAGCTGCTAAAGGACTGCTATACCTTCATCAGAACAACATCATACATAGAGATATAAAAACAAACAACATTCTTCTTACACATGATTATGAAGCTATGCTGGGTGATTTCGGTTTGGCTAAAATTGCCAGTGAAGAATTCTCATGCTCAATAGAATGTCCTGGAAATTTGGAATACTGGGCACCAGAATATGCAGCATATGGTAAAGTATCAAATAAAACAGATGTATATTCTTTTGGAGTGGTTCTAGTTGAGCTAATAACTGGAATGAGGACTACAGATAAAAGACTTGGAGGAAAGGGTCTAGTAGGATGGGCTAGACCACTACTAAGAGAAGGGAATTGTCAAAAACTTGTTGATGGAAGGATAATGGATACACATGATTGTCATCAAATCTTTTGGATGAGCCGTCTAGCTGGAAATTGTCTTAACAAAGATCCTCATAAACGATTGGATATGAATACAGTGGTCAAAGCCTTAATACATATAGAGGAAGGTTGCAGTAGCTGCAATGTGGAAAAAGACAGTAGTACCCTTGCCATGTCAGACTATTCTAAATCAAAAGATGATATGCAGAACTCTTCAGAATCAGATGGTAAAAGTGGAAATAATGGTGGTAGTAGTAGTAGTTCCAAGTCCAACACAGCATATTGCTACTATAAAACTGGAGAAGTGGAAAATAGGTCACCAGTATTGGAGAAGTGTGTTGCCTTCATGAGCAATCCAATTCAGCAGCAACACACAGACACACAATTGGAGAATTCTGCTCAATGGTGGCGCCTATTTGGCTGGTGGGAAGTAGAAAAAGAAGAATAA 1284 0.3808 MSLTHHNNHEEHHEIVEQTSENSVCPMCYNKRPKLDWTRRDFTYAELHTATQGFSAKNFLSEGGFGSVYKGEILGYKIAVKQCIHASHKQEKEFKSEVDALGKARHENIVMLLGSCSEGNHRLLAYEYVCNGSLDQHLSQYSRKPLCWQDRVKVATGAAKGLLYLHQNNIIHRDIKTNNILLTHDYEAMLGDFGLAKIASEEFSCSIECPGNLEYWAPEYAAYGKVSNKTDVYSFGVVLVELITGMRTTDKRLGGKGLVGWARPLLREGNCQKLVDGRIMDTHDCHQIFWMSRLAGNCLNKDPHKRLDMNTVVKALIHIEEGCSSCNVEKDSSTLAMSDYSKSKDDMQNSSESDGKSGNNGGSSSSSKSNTAYCYYKTGEVENRSPVLEKCVAFMSNPIQQQHTDTQLENSAQWWRLFGWWEVEKEE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02596 427 SUPERFAMILY Protein kinase-like (PK-like) 27 316 IPR011009 -
Mepo5g02596 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mepo5g02596 427 Gene3D Phosphorylase Kinase; domain 1 34 128 - -
Mepo5g02596 427 ProSiteProfiles Protein kinase domain profile. 54 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02596 427 Gene3D Transferase(Phosphotransferase) domain 1 129 344 - -
Mepo5g02596 427 SMART serkin_6 54 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02596 427 FunFam Proline-rich receptor-like protein kinase PERK8 15 128 - -
Mepo5g02596 427 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 129 332 - -
Mepo5g02596 427 MobiDBLite consensus disorder prediction 352 369 - -
Mepo5g02596 427 MobiDBLite consensus disorder prediction 340 369 - -
Mepo5g02596 427 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Mepo5g02596 427 PANTHER OS01G0253100 PROTEIN 23 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02596 Mepo-Chr5 31430528 31434003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02596 42 327 Trihelix Transcription Factor Family AT5G38560 45.151 1.21e-75 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mepo5g02596 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02596 - - cam:101502867 613.994