Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02594 ATGAGTCGAGTGAAAAATGAGATTGAAGATGATATGCTCTGCAACGATCAAACATGGTCACGGTCGAATGGTGAGGGTAACGGAGGAAGTGTTAATGGTGGAGTTGTTCTGAAGAAAGGGCCGTGGACATCTGCAGAAGATGCTATTTTGGTTGACTACGTCAGGAAGCATGGAGAAGGCAACTGGAATGCTGTTCAGAAGCATTCGGGTTTGTCTCGTTGTGGAAAAAGTTGCCGTCTGAGATGGGCAAATCACTTAAGGCCAAATTTAAAGAAAGGATCATTTACTGCTGATGAGGAGCATTTGATTGCTCAACTCCATTTCGAAATGGGAAACAGATGGGCACGTATGGCTGCGCACTTGCCTGGTCGTACAGATAATGAAATAAAGAACTATTGGAATACCCGGACCAAGAGGCGTCTTCGGGCTGGCTTGCCACTCTATCCTCCAGAAGTTAGTTTGCGAGCAATGAAAGGGAGTAAACATGGCCAAGGCACTGGTGGAATCAATGATGGTGATAGAGGGCATCATGATTTCTTGCCGAAAAACAACTATGAGATGCATGATGCAATATTTGACAATTTGAAGGAAAATCAGGGAATCTTACCTATTACAATTTTGCCTGAGAATCCTGATATTTCTGCTAATAGCATTATGCGAAACAGTCTTGATTCTCCTCCATATTGCAATCCTGTGCCATCAACAATGTCTTTTCTTGGTTCAAGTGGAACGAACAATAATTGGTTTTATCCCTTTTACCATGTTCAGGATCATAGTTCTGATAAGACTGTACAATCTTTCGGATTGCATTCTCCTCTTGATCCCAGTCTCCCCTCACATAACTCAATGTATTACTGCCATTCCGTATCAAATGGCAATTCCTCTACTTCTAAGCCGACATCCAAGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAAACCGGCTTTGGTGGCTGGGGATGTAACTTTCCCCCATCTCCACTGAATGAGTCTGTTGATGTATTCAATCAGTCTCCTCTGCGACATGGTGCGCAAGAGTCCGGTTGTTCTTCACCAAATAATAGTGGCACGCTTGAGGCCATTATTTATCAGAAGAAGACTCTTCCAAATTCAAATAACAATTCTTCTGACAAGAGTTCGCATTCATCTACTACAACTCCTGTTGACAGAGGTGAGAGTTCTGCTTTGAACATGAATGAGACAGAATGGGATGACTACGCTGACAATGCATCTCCCTTTGGTGCAACCTCAATCCTGAACGAGTGCCATGCTGTTAACACCAATACAAACTCATGGGATAAATTGACACCTGCTCAGAACTTTAGTGGCAGCAATGTTAAATATGAGCCTGTTGACCAAGTTTCTACCCCAAACAGTGAAAACCGATCTATGTCTATGTTGAACATCACTTGGCCAGATGTCATGTTAGCTTCAGATTGGCATGAGCAGTGCTATGGCCACGAGAAGAACATGAATGAGGCTAGTGACAACCTAACAGATTATAAACATGTGGCTGGTGGGACTTATTCTTCAAGTACAGGGGGTCGCTTTATGCACATGGCATGA 1572 0.4345 MSRVKNEIEDDMLCNDQTWSRSNGEGNGGSVNGGVVLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGSFTADEEHLIAQLHFEMGNRWARMAAHLPGRTDNEIKNYWNTRTKRRLRAGLPLYPPEVSLRAMKGSKHGQGTGGINDGDRGHHDFLPKNNYEMHDAIFDNLKENQGILPITILPENPDISANSIMRNSLDSPPYCNPVPSTMSFLGSSGTNNNWFYPFYHVQDHSSDKTVQSFGLHSPLDPSLPSHNSMYYCHSVSNGNSSTSKPTSKAVKLELPSLQYPETGFGGWGCNFPPSPLNESVDVFNQSPLRHGAQESGCSSPNNSGTLEAIIYQKKTLPNSNNNSSDKSSHSSTTTPVDRGESSALNMNETEWDDYADNASPFGATSILNECHAVNTNTNSWDKLTPAQNFSGSNVKYEPVDQVSTPNSENRSMSMLNITWPDVMLASDWHEQCYGHEKNMNEASDNLTDYKHVAGGTYSSSTGGRFMHMA 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02594 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 141 IPR017930 -
Mepo5g02594 523 MobiDBLite consensus disorder prediction 370 395 - -
Mepo5g02594 523 Gene3D - 38 91 - -
Mepo5g02594 523 FunFam MYB-related transcription factor 38 91 - -
Mepo5g02594 523 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 20 494 - -
Mepo5g02594 523 Gene3D - 94 141 - -
Mepo5g02594 523 ProSiteProfiles Myb-like domain profile. 37 86 IPR001005 -
Mepo5g02594 523 SMART sant 38 88 IPR001005 -
Mepo5g02594 523 SMART sant 91 139 IPR001005 -
Mepo5g02594 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 90 IPR017930 -
Mepo5g02594 523 Pfam Myb-like DNA-binding domain 92 135 IPR001005 -
Mepo5g02594 523 Pfam Myb-like DNA-binding domain 39 86 IPR001005 -
Mepo5g02594 523 FunFam Transcription factor GAMYB 94 140 - -
Mepo5g02594 523 CDD SANT 41 86 IPR001005 -
Mepo5g02594 523 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Mepo5g02594 523 CDD SANT 94 135 IPR001005 -
Mepo5g02594 523 SUPERFAMILY Homeodomain-like 38 133 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02594 Mepo-Chr5 31422727 31428213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02594 36 500 MYB Transcription Factor Family AT3G11440 40.845 4.65e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo5g02594 Myb_DNA-binding 6.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02594 K09422 - gmx:100805804 646.736