Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02551 ATGTCTTTCTTCAAATCCTATGGAAAAGTTGATGAACGTGATCAAATGATGTTAGAAGCAAAAAGAAAAACCCGAAAGAGAATCACAATCATAAGCTTATCCTCAATAATCCTTATTGGTGTTGTAATTGCAGCTGTATTAGGAATTGTTAACTCAAAAAATGATGATAACAACAATAATGCATCTCAAAATTCAGTGACTAATTCTATGAAAGCTGTTTGTGATGTTACATTGTACAAAGATTCATGTTATAACAGCCTTAGCTCTATTGTTGGCTCAGGAAAAGATGTTCAACCTGAGGAGTTGTTTAAGTTATCAATCAATGTGGCATTAACTCATGTGTCCAAAGCTATTGAGTATTTCAATGAACATGGTGTTTTCAAAAGATTGATAGATAATAGTGGAACCAAGGAAGCTTTGAAAAATTGTAGGGATCTTTTGGATCTTGCTGTTGATCATTTGAATAACTCATTGACTACTTCAAGGGAAAATTCTTCACTTCATCAAGTTTTTGATGATCTCCAAACATGGTTAAGTGCTGCAGGCACGTACCAACAAACTTGCATTGAAGGCTTTGAGGATACAAAAGAACAACTTAAGACAAGTGTAACAAGCTACCTTAAAAACTCTACAGAATACACAAGTAACAGTCTTGCCATCATAACATATATTAACAAGGCTATAAACACTCTCAATTTGAGGCGTTTAATGAGTTTACCATATGAAAATGAAACACCAAAATGGCTTCATTCAAAAGATAGGAAGCTACTTAGTACCAAGGATTTAAGATCAAAAGCTGATATTGTTGTTGCTAAAGATGGTAGTGGAAAATATAAAACTATATCTGATGCACTTAAACATGTTCCTAATAAGAGTAAGGAGAGGACTTTGATCTATGTGAAGAAAGGGATTTACTATGAAAATGTGAGGGTTGAAAAAACAAAATGGAATGTGATGATTATTGGTGATGGTATGACTTCTTCAATTGTATCTGGCAAGCTTAATGTTGTGGATGGTACACCAACATTTTCAACTGCAACATTTGCTGTGTTTGGAAGGAATTTCATAGCAAGAGACATGGGTTTTCGCAATACAGCAGGTCCACAAAAGCATCAAGCAGTAGCACTAATGACAAGTGCTGATCAAGCAGTTTATTATAAGTGTCACATTGATGCATATCAAGACACTCTTTATGCTCATTCCAATCGACAATTCTATAGAGAATGCAACATTTATGGAACAGTTGATTTCATTTTTGGAAATTCAGCAGTTGTGATTCAGAACTGCAACATTATGCCAAAGTTACCTATGCATGGACAACAAATCACTATCACAGCACAGGGAAAAACTGACCCTAACATGAACACAGGTATCTCAATTCAATATTGTAACATTTCACCTTATGGAAACTTGAGTAATGTTAAAGTATACCTTGGAAGACCTTGGAAGAATTATTCAACCACAGTTTACATGAGAACAAGAATGGATGGTTTTATTAATCCAAATGGTTGGTTACCTTGGGTAGGAAACTCAGCACCAGATACAATTTTTTATGCAGAATTTCAGAATGTTGGACCAGGTGCTTTAACAAAGAATAGAGTGAAGTGGAAGGGTTTGAAAAATATTTCTAGTAAACAAGCTAGTAAGTTTTCAGTCAAGGCATTTCTTCAAGGAGATAGATGGATTCCTGCTTCAGGTTCACCTTTTAACTCTAATATATGA 1722 0.3461 MSFFKSYGKVDERDQMMLEAKRKTRKRITIISLSSIILIGVVIAAVLGIVNSKNDDNNNNASQNSVTNSMKAVCDVTLYKDSCYNSLSSIVGSGKDVQPEELFKLSINVALTHVSKAIEYFNEHGVFKRLIDNSGTKEALKNCRDLLDLAVDHLNNSLTTSRENSSLHQVFDDLQTWLSAAGTYQQTCIEGFEDTKEQLKTSVTSYLKNSTEYTSNSLAIITYINKAINTLNLRRLMSLPYENETPKWLHSKDRKLLSTKDLRSKADIVVAKDGSGKYKTISDALKHVPNKSKERTLIYVKKGIYYENVRVEKTKWNVMIIGDGMTSSIVSGKLNVVDGTPTFSTATFAVFGRNFIARDMGFRNTAGPQKHQAVALMTSADQAVYYKCHIDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIMPKLPMHGQQITITAQGKTDPNMNTGISIQYCNISPYGNLSNVKVYLGRPWKNYSTTVYMRTRMDGFINPNGWLPWVGNSAPDTIFYAEFQNVGPGALTKNRVKWKGLKNISSKQASKFSVKAFLQGDRWIPASGSPFNSNI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02551 573 SMART PMEI_2 65 220 IPR006501 GO:0004857
Mepo5g02551 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 224 IPR035513 -
Mepo5g02551 573 Gene3D - 262 573 IPR012334 -
Mepo5g02551 573 Pfam Plant invertase/pectin methylesterase inhibitor 69 220 IPR006501 GO:0004857
Mepo5g02551 573 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Mepo5g02551 573 CDD PMEI-like_3 72 226 - -
Mepo5g02551 573 FunFam Pectinesterase 261 573 - -
Mepo5g02551 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 226 IPR035513 -
Mepo5g02551 573 SUPERFAMILY Pectin lyase-like 264 570 IPR011050 -
Mepo5g02551 573 NCBIfam pectinesterase inhibitor domain 61 223 IPR006501 GO:0004857
Mepo5g02551 573 Pfam Pectinesterase 267 559 IPR000070 GO:0030599|GO:0042545
Mepo5g02551 573 FunFam Pectinesterase 66 225 - -
Mepo5g02551 573 PANTHER PECTINESTERASE 39 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02551 Mepo-Chr5 30955786 30960046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02551 7 573 Carbohydrate Esterase AT3G10710 56.119 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02551 - - gmx:100811152 897.116