Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02550 ATGTCACCTTCACTTTCCCTTCTCTTTTTCATCCTCTTAGCACCATTATTACTCCTAGCTCAATCTCCTCCACCTTCTTCTTCTTCTCCTCCTTCTTCTTCTGCGGCGTGCAAAACGACATTGTATCCGAAACTATGTCGCTCGATGCTATCTGCAATTCGTTCATCACCATCAGATCCATATAACTACGGAAAATTCTCCATAAAGCAAAACCTAAAAGTAGCAAGAAAACTAGAAAAAGTATTCATAGATTTCCTCAATCGCCACCAATCATCTTCATCACTAAACCATGAAGAGATTGGTGCATTAGTTGATTGCAAAGACCTTAACACACTAAATGTAGACTACTTAGAATCCATTTCTGATGAACTCAAATCAGCTAGTTCTTCTTCATCATCAGATACAGAACTTGTTGATAAAATTGAAAGCTATCTTAGTGCTGTAGCTACAAACCATTATACTTGCTATGATGGTTTGGTTGTGACAAAAAGCAACATTGCTAATGCTCTTGCTGTTCCATTGAAAGATGCTACACAATTTTATAGTGTTTCACTTGGATTGGTTACTGAGGCTTTGAGTAAAAATATGAAAAGGAATAAGACACGCAAACATGGTCTTCCTAATAAATCTTTCAAAGTTAGGCAGCCACTTGAGAAGTTAATCAAGCTTCTCCGCACAAAATATAGCTGCCAAAAAACATCCTCAAATTGTACAAGCACAAGAACAGAAAGGATTCTTAAAGAAAGTGAAAGCCATGGAATTTTACTAAATGACTTTGTGCTTGTGAGTCCTTATGGGATAGCCAACCACACTTCCATTGGAGATGCTATTGCTGCTGCACCAAATAACACAAAACCAGAAGATGGTTATTACCTTATCTATGTTAGAGAAGGATACTATGAGGAATATGTTATTGTTCCTAAACACAAGAATAATATCCTTTTAGTTGGAGATGGTATTAACAATACAATCATCACAGGGAACCATAGTGTCATTGATGGTTGGACAACTTTCAATTCTTCCACATTTGCTGTTTCTGGAGAAAGATTTATAGCAGTAGACATTACATTCAGAAACACAGCTGGACCTGAAAAACACCAAGCAGTAGCAGTGAGAAACAACGCCGACCTCTCAACATTCTACCGATGCAGTTTCGAGGGATATCAAGACACACTCTATGTCCACTCTTTAAGACAATTCTACAGAGATTGCAAAATCTATGGCACCGTCGACTTCATCTTCGGCAACGCAGCTGTAGTTTTCCAAAATTGTAACATCTATGCTAGAAAACCATTGCCAAATCAGAAAAATGCTGTCACAGCACAAGGTAGAACTGATCCAAATCAAAACACTGGAATTTCAATTCAAAATTGCACGATCGATGCTGCACAAGATTTGGCTAATGACTTGAATTCAACAATGAGTTACTTAGGTAGACCATGGAAGATTTATTCAAGGACTGTTTATATGCAATCATATATTGGTGATTTTGTTCAACCTTCTGGTTGGTTAGAGTGGAATGGAACAGTTGGATTAGACACTATTTTCTATGGTGAATTTGATAACTATGGACCTGGTTCTATAACTAACAATAGGGTACAATGGCCTGGTCATTTTCTTTTGAATGATACTCAAGCTTGGAACTTTACAGTACTTAACTTTACTTTGGGAAATACTTGGCTTCCTGATACAGATATACCTTACACTGAAGGATTACTCAACTAG 1725 0.3733 MSPSLSLLFFILLAPLLLLAQSPPPSSSSPPSSSAACKTTLYPKLCRSMLSAIRSSPSDPYNYGKFSIKQNLKVARKLEKVFIDFLNRHQSSSSLNHEEIGALVDCKDLNTLNVDYLESISDELKSASSSSSSDTELVDKIESYLSAVATNHYTCYDGLVVTKSNIANALAVPLKDATQFYSVSLGLVTEALSKNMKRNKTRKHGLPNKSFKVRQPLEKLIKLLRTKYSCQKTSSNCTSTRTERILKESESHGILLNDFVLVSPYGIANHTSIGDAIAAAPNNTKPEDGYYLIYVREGYYEEYVIVPKHKNNILLVGDGINNTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRDCKIYGTVDFIFGNAAVVFQNCNIYARKPLPNQKNAVTAQGRTDPNQNTGISIQNCTIDAAQDLANDLNSTMSYLGRPWKIYSRTVYMQSYIGDFVQPSGWLEWNGTVGLDTIFYGEFDNYGPGSITNNRVQWPGHFLLNDTQAWNFTVLNFTLGNTWLPDTDIPYTEGLLN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02550 574 FunFam Pectinesterase 255 572 - -
Mepo5g02550 574 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Mepo5g02550 574 NCBIfam pectinesterase inhibitor domain 1 180 IPR006501 GO:0004857
Mepo5g02550 574 CDD PMEI-like_3 35 190 - -
Mepo5g02550 574 Gene3D - 259 574 IPR012334 -
Mepo5g02550 574 Pfam Pectinesterase 260 557 IPR000070 GO:0030599|GO:0042545
Mepo5g02550 574 SUPERFAMILY Pectin lyase-like 258 571 IPR011050 -
Mepo5g02550 574 SMART PMEI_2 28 187 IPR006501 GO:0004857
Mepo5g02550 574 PANTHER PECTINESTERASE 16 562 - -
Mepo5g02550 574 Pfam Plant invertase/pectin methylesterase inhibitor 35 186 IPR006501 GO:0004857
Mepo5g02550 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 191 IPR035513 -
Mepo5g02550 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 189 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02550 Mepo-Chr5 30949596 30955064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02550 4 574 Carbohydrate Esterase AT3G10720 57.282 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02550 K01051 - gmx:100816503 930.628