Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02549 ATGGATATAGATCTCAGGTTACCCACTGGTGAACATGATAAGGAAGAAGAAGAAGAAACAACTACACTTGATAACATGTTGGAAGGTGAAGAAAAATTGCACAATGGAGGTATGGACGACAGACATATGGTTGAAGCTGGCATTGAGGTACATGCTCTAAATGGTGGAGATCTGAATTCCCCCACAGTTGATATTGCAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGTATGGAATTCGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAATATGCTCGATCAATGGGATTCAACACTGCAATACAAAATAGCCGCCGTTCAAAAACCTCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGAGAGTATGATAAATCCTTCAATCGACCACGAGCTCGACAGAACAAGCAAGAATCTGAAAATTCAACTGGTCGAAGATCTTGCTCTAAGACCGACTGTAAAGCAAGCATGCATGTAAAAAGAAGGCAAGATGGGAAATGGGTCATTCATAGCTTTGTGAAGGAGCATAATCACGAACTTTTACCAGCCCAGGCAGTAAGTGAACAAACAAGAAGAATGTATGCTGTGATGGCCAGGCAGTTTGCAGAATACAAAACTGTGGTTGGTATCAAGAATGAAAAGAATCCGTTCGATAAAGGTCGTAATTTGGGTCTGGAGTTTAGGGAGGCTAAACTTATGCTTGATTTTTTTATTCAGATGCAAAGTATGAATTCTAACTTCTTTTATGCAGTAGATCTTGGTGAGGATCAACGGCTGAAAAATCTTTTATGGATTGATGCTAAAAGTAGGCATGACTATATCAACTTCTGTGATGTAGTGTCATTTGATACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGGGTGAACCAGCACTACCAATTTATATTACTTGGGTGTGCCTTGATATCAGATGAAAGTGCCGCAACATATTCTTGGTTATTACAAACATGGCTGAAAGGTGTAGGTGGTCAAGCTCCAAAAGTTATAATTACTGACCATGACATAACTTTGAAATCAGTTATTTCAGATGTATTTCCTAGTGCTTGCCATTGTATTTGCTTATGGCATATACTGGGGAAGGTATCTGAAAATTTAGCTCCTGTAATTAAAAAACATGAGAATTTTATGGCAAAATTTGAAAAATGCATATATAGGTCATTGACAAGTGATGATTTTGACAATAGATGGGAGAAAATTTTGGATAGATTTGAGCTTCGACAGGATGAATGCATGCAGTCTTTGTATGAAGATCGCAAGTTATGGGCACCAACATTCATGAAGGATGTGTTCTTAGGTGGCATGTCTACTGCCCAACGATCTGAAAGTGTAAATTCCTTCTTTGACAAATATGTTCATAGGAAGACCTATGTGCAAGATTTTGTTAAACTGTATGAAACCATCTTGCAAGACAGGTATGAAGAGGAGGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTGAAAACTCCTTCACCTTTAGAAAAGAGTGTTGCAGGGATTTGCACCCATACAGTATTCAAGAAGATCCAAGCTGAGATTATTGGTGCAGTGGCTTGTCATCCTAAACTTGACAGGCAGGATGAGACAAACGTTGTTCACAGGGTGCATGATATGGAAATAAACAGAGACTTTTTTGTTGTGGTGAATGAAGTAAAATCAGAGGTGTCTTGTATATGTCGACTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGGTGGTTCTTCAATATTCTGGCCATTCAGTGTTCCCATCTCAATATGTTTTGAAACGGTGGACAAAAGATGCAAAGGTCAGGAATGTCACGGGAGAAGAATCTGAACATATGCTGGCTAGGGTGCAACGATACAATGATTTGTGTCATCGATCATTAAAACTGAGCGAAGAGGGATCATTGTCTCAAGATAGTTATAGTATTGCATTCCATGCACTAAATGAGGCACACAAAAGTTGCGTGAGTGTTAACAATTCTAGCAAGAGTCCTACAGAAGCTGGTACATCAGGGGCTCATGGTCAGCTTTCCATTGAAGAAGATACCCAAAGTAGAAATATGGGAAAGTCAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGGTGAACTCGGAGGCAGAAGTGATGACTGTCGGGGCACTAGACAACATGCAACAAATGGACAAATTCAGCACAAGAACTGCAGTAACCCTCGAAGGTTATTATGGTGCACAACAGAGTGTGCAGGGAATGTTGAACTTAATGGGACCAACACGTGATGATTACTACGGGAATCAACAGACTCTTCAAGGACTGGGACCAATGAGTTCTATACCAACCAGCCACGATGGTTATTATGGTGCACATCAAAGCATGCCTGGTTTGGCACAACTGGATTTTTTGCGAACTGGTTTCACATACAGCATTAGGGATGATCCTAATGTAAGGGGAGCACAGTTACACGAAGATCCATCAAGACACGCTTGA 2535 0.3953 MDIDLRLPTGEHDKEEEEETTTLDNMLEGEEKLHNGGMDDRHMVEAGIEVHALNGGDLNSPTVDIAMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQESENSTGRRSCSKTDCKASMHVKRRQDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAVMARQFAEYKTVVGIKNEKNPFDKGRNLGLEFREAKLMLDFFIQMQSMNSNFFYAVDLGEDQRLKNLLWIDAKSRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESAATYSWLLQTWLKGVGGQAPKVIITDHDITLKSVISDVFPSACHCICLWHILGKVSENLAPVIKKHENFMAKFEKCIYRSLTSDDFDNRWEKILDRFELRQDECMQSLYEDRKLWAPTFMKDVFLGGMSTAQRSESVNSFFDKYVHRKTYVQDFVKLYETILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGICTHTVFKKIQAEIIGAVACHPKLDRQDETNVVHRVHDMEINRDFFVVVNEVKSEVSCICRLFEYKGYLCRHALVVLQYSGHSVFPSQYVLKRWTKDAKVRNVTGEESEHMLARVQRYNDLCHRSLKLSEEGSLSQDSYSIAFHALNEAHKSCVSVNNSSKSPTEAGTSGAHGQLSIEEDTQSRNMGKSNKKKNPTKKKKVNSEAEVMTVGALDNMQQMDKFSTRTAVTLEGYYGAQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPMSSIPTSHDGYYGAHQSMPGLAQLDFLRTGFTYSIRDDPNVRGAQLHEDPSRHA 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02549 844 MobiDBLite consensus disorder prediction 1 21 - -
Mepo5g02549 844 Pfam FAR1 DNA-binding domain 90 192 IPR004330 -
Mepo5g02549 844 MobiDBLite consensus disorder prediction 1 16 - -
Mepo5g02549 844 Pfam MULE transposase domain 289 381 IPR018289 -
Mepo5g02549 844 Pfam SWIM zinc finger 570 603 IPR007527 GO:0008270
Mepo5g02549 844 SMART 26again6 580 607 IPR006564 GO:0008270
Mepo5g02549 844 MobiDBLite consensus disorder prediction 679 707 - -
Mepo5g02549 844 MobiDBLite consensus disorder prediction 679 729 - -
Mepo5g02549 844 ProSiteProfiles Zinc finger SWIM-type profile. 569 605 IPR007527 GO:0008270
Mepo5g02549 844 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 678 IPR031052 GO:0006355
Mepo5g02549 844 MobiDBLite consensus disorder prediction 133 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02549 Mepo-Chr5 30907957 30916474 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mepo5g02549 FAR1 2.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02549 - - cam:101505784 1584.31