Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02548 ATGGGGTCTCAAGTTGTTGATGAAAGTAATAATGAAAACCAATCGCAATTCCAGCCTCTGGCGCGGCAAAATTCAATGTACAATCTTACCCTTGATGAAGTTCAGAATCACTTGGGTGACTTAGGAAAGCCACTAAGTAGTATGAACCTTGACGAGCTTCTGAAAAATGTATGGACTGTTGAGGCAAACCAATCAATTCGCATGGAAAACGAGAACACAGCTCAAGCCGGACAAGTTGTTTTTCAACGTCAACCTAATCTGTCGTTAACCGGTCCGTTAAGCAAGAAGACAGTTGATGAAGTTTGGAGAGATATCCAACAAAACAACGATCATGAGGAGGTGAAGTCTCAAGAGATACAGTCTACTTTGGGTGAGATGACATTAGAGGATTTTTTGGTGAAAGCAGGCGTTGTTTCGGCTGCATCTTCAAATAGAAAGAATACTAATGGTCCTATTCCTAAAGTCAGTGTTGTTGAATCGAATGTAGCGTTGCCACAGTTTTCTCCACATGGTCCGTGGATACAGTATGCACAACCACACTATCAGCATCCACAACAAAGTGTGATGGCGACTTATGTTCCGAGTCAGATCATAGCGCAGTCACTGCAAATGGCAGCCGGTGCTCCATCGGACGGCGTTCCATATACAGATGGTCAGGTGGCGTTGGCTTCACCTGTGATAGGAAACTTATCTGATACACAGAAATCTGCGAGAAAAAGGGGACCGGAGGACATGATTGAGAGGACTGTTGAGAGGAAGCAGAAGAGGATGATTAAGAATCGGGAATCTGCTGCGCGCTCAAGAGCAAGGAAACAGGCATACACAACTGAATTGGAGATCAAAGTCTCGCGTCTGGAAGAGGAAAATGAAAAGCTGAGGAAGGAGAAGGAGCTTGAGAACATGCTAGCTAATGCTCCGCCGCCCGAACCTAAATGCCAGCTTCGTCGTGTATCATCGGCTTCATTTTGA 969 0.451 MGSQVVDESNNENQSQFQPLARQNSMYNLTLDEVQNHLGDLGKPLSSMNLDELLKNVWTVEANQSIRMENENTAQAGQVVFQRQPNLSLTGPLSKKTVDEVWRDIQQNNDHEEVKSQEIQSTLGEMTLEDFLVKAGVVSAASSNRKNTNGPIPKVSVVESNVALPQFSPHGPWIQYAQPHYQHPQQSVMATYVPSQIIAQSLQMAAGAPSDGVPYTDGQVALASPVIGNLSDTQKSARKRGPEDMIERTVERKQKRMIKNRESAARSRARKQAYTTELEIKVSRLEEENEKLRKEKELENMLANAPPPEPKCQLRRVSSASF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02548 322 SUPERFAMILY Leucine zipper domain 252 297 IPR046347 GO:0003700|GO:0006355
Mepo5g02548 322 CDD bZIP_plant_BZIP46 252 298 - -
Mepo5g02548 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Mepo5g02548 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 320 IPR043452 GO:0003700|GO:0045893
Mepo5g02548 322 MobiDBLite consensus disorder prediction 298 322 - -
Mepo5g02548 322 SMART brlzneu 248 304 IPR004827 GO:0003700|GO:0006355
Mepo5g02548 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
Mepo5g02548 322 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 250 302 - -
Mepo5g02548 322 Gene3D - 250 304 - -
Mepo5g02548 322 Pfam bZIP transcription factor 252 297 IPR004827 GO:0003700|GO:0006355
Mepo5g02548 322 Coils Coil 275 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02548 Mepo-Chr5 30896499 30901493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02548 14 322 bZIP Transcription Factor Family AT3G56850 52.716 1.87e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo5g02548 bZIP_1 1.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02548 K14432 - gmx:100784924 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02548 5 30896499 30901493 Mepo5g02548 5 30896499 30901493 ECH