Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02547 ATGGAATCCGAAATGAGAAAGACATTGAATTCAAACCATTTTCCCATGGCTAGGAGAGGTTTTGGATCCAAGGGAGGCAAGATACTACTCTTAGCAAACCATTTTCGAGTTGGCCTGAGCAAGAACGATGGCTACTTCTATCACTACAATGTTGCTTTATGTTATCAAGATGGACACCCGGTTGAAGTGAAAGGTGTTGGGAGAAAATTCATTGACAAACTTTGTGAAACATATGATGTATTAAGAAACAAGAATTTTGCATATGATGGTGAGAAAAGTTTATTCACTCTTCGTTCTCTACATCATAAAAAGCAGGAATTCATTGTCGTGTTAGAGGAAGTTTTGTCAACGAGGGTTGGAAGCAACCCTGCTGAAGCAACCAAGAGAATGAAGCGTCAATCTCGGTCCAAAACTTTTAAGGTTGAGATTAGTCATGTATCTAAAATTCCATTACAAGAAATTGCAGATGCCTTAAAAGGTCAGGAATCTGAACACTATCAGGAAGCATTTAATTTCCTTGACACAATACTGAGGCAGAATGCAGCAAAACAGGGATGTCTCCGTATTCATAAATCGTACTTTCACGATAATCAAAAGAATATTACAAACCTGGACGGTGGTATTCTATGTTGTCGTGGCTTCCATTCGAGCTTCAGAGTCACACAAAGAGGTTTATCTCTCAATGTTGATGTGTCAACTACATTACTCGTAAAGCCTGGTCCTGTACTGGATTTCCTTCTCCAGAATCAGAATGTTCAGAAACCAAACTTGATTGATTGGAACAAGGCAAAAAGAATGTTGAAAAATCTTAGAATCAAGGCTAACAATACACAGTGCAAAATCACTGGACTAAGTGAAAAGTCCTGCAGGACACAAAAATTTTTGTTTAAACATGGAAATGATGCTAATGGTGAAGTGCAGTCAAGTGAAATAACAATTTATGAATACTTCAAACACCACAAAAAGATTGAACTTTGTTATTCTGTTGATATGCCATGCATCAATGTTGGGAAACCAAAGAGGCCAATTTATTTTCCTATAGAGTTATGCACATTAGTCTCATTGCAGCGATACACTAAGGCGTTGTCGCATAAGCAAAGGGCTCAACTGATATTGGAATCAAGGACTAGTCCTCATGAAAGGAAAGAAGCTTTGCAACATTCTTTAAGAAACAGAAGATATGGCGATGAGCCTATGCTTCGCTCTTTAGGGATTACTATCGAACCTTCCTTTACACAAGTTGACGGTCGTGTCTTGCAACCTCCAACACTTATTGTTGGAAGGGGACATAACTTTTGTCCCCGAAATGGGAGCTGGAATTTCAATGATAAGAAACTAATTGAACCTGTGAAGATTAAGCGTTGGGCAATTGTAAACTTTTCATCACAGTGTGATACGAAACATTTGTGCAGTATGATTAAAAAATGTTCTGAAATGAAAGGGATGCTCATAGATCCTCCGTTCGACATATTTCAAGAGGATAGTCGCCATAGGAGTGAGTCACCAGTAGTCAGGGTTGCAAGAATGTATGAAATGGTAAAGACCAAGCTGCCGGGACCCCCTACGCATCCTCTAGCTCAGCTTCTTTTGTGTATTATTCCGGTTAGCAAGAATTGTGACATTTATGGTCCTTGGAAAAGAAGATGTCTTGTTGATGAAGGGATTGCAACACAATGCATTGCTCCAACAAAAATTAATGATCACTACATTACTAATGTTCTACTGAAAATTAATGCAAAGCTTGGTGGAATGAATTCCTTTTTGTTAACTGAATTTGAGCATTCGATACCACTATTTTCAAAAATACCTACATTGGTTATCGGAATGGATGTTTCACATGGATCTCAAGGTCAATCAGAAGCACCATCCATTGCTGCGGTTGTGAGCTCAAGATGCTGGCCTCAAATTTCTCGTTACAAAGCTGTAGTCCGCACTCAGTCGTCAAAAGTAGAGATGATTCAGTCTCTATTCATGCCTGTTTCTGATACTAAGGATGACGGTATCATCAGTGAGTTGCTTAAGGACTTCCAAACAACTTCAGGAGTGAAGCCTCAACAAATTATAATTTTCAGGGACGGCGTGAGCGAATCACAGTTCAACCAAGTTGTCAACATTGAATTGAATGAAATCATAAAGGCATGTAAACATTATGATGAAAGTTGGTGTCCAAAGTTTACTTTGATTGTTGCTCAGAAGAATCATCACACTAGGTTCTTCAAAGCCAATGCTCCTCAAGAAAATGTTTCACCTGGAACTGTTATTGATAACACTATATGTCATCCCAAAAACAATGACTTCTACATGTGTGCACATGCTGGGAGGATTGGCACAAGTCGTCCTACTCATTACCATGTTTTACATGATGAAATTGGGTTCTCAGCAGATAATTTGCAAGAATTTGTGCATTGTCTATGTTATGTGCACCAAAGGAGCACAAATGCTATATCAATAGTTGCACCAATATATTATGCTGACCTAGCTGCTGCTCAGATAGCACAATTTATAAAATTTGATGAGTCAGAGAATATTTCCAGCCACAATGAATTCATATCTCAAATACCTGAGTTACCACGTCTTCATGAAAGAGTTGCAGATTCTATGTTCTTTTGTTAA 2613 0.385 MESEMRKTLNSNHFPMARRGFGSKGGKILLLANHFRVGLSKNDGYFYHYNVALCYQDGHPVEVKGVGRKFIDKLCETYDVLRNKNFAYDGEKSLFTLRSLHHKKQEFIVVLEEVLSTRVGSNPAEATKRMKRQSRSKTFKVEISHVSKIPLQEIADALKGQESEHYQEAFNFLDTILRQNAAKQGCLRIHKSYFHDNQKNITNLDGGILCCRGFHSSFRVTQRGLSLNVDVSTTLLVKPGPVLDFLLQNQNVQKPNLIDWNKAKRMLKNLRIKANNTQCKITGLSEKSCRTQKFLFKHGNDANGEVQSSEITIYEYFKHHKKIELCYSVDMPCINVGKPKRPIYFPIELCTLVSLQRYTKALSHKQRAQLILESRTSPHERKEALQHSLRNRRYGDEPMLRSLGITIEPSFTQVDGRVLQPPTLIVGRGHNFCPRNGSWNFNDKKLIEPVKIKRWAIVNFSSQCDTKHLCSMIKKCSEMKGMLIDPPFDIFQEDSRHRSESPVVRVARMYEMVKTKLPGPPTHPLAQLLLCIIPVSKNCDIYGPWKRRCLVDEGIATQCIAPTKINDHYITNVLLKINAKLGGMNSFLLTEFEHSIPLFSKIPTLVIGMDVSHGSQGQSEAPSIAAVVSSRCWPQISRYKAVVRTQSSKVEMIQSLFMPVSDTKDDGIISELLKDFQTTSGVKPQQIIIFRDGVSESQFNQVVNIELNEIIKACKHYDESWCPKFTLIVAQKNHHTRFFKANAPQENVSPGTVIDNTICHPKNNDFYMCAHAGRIGTSRPTHYHVLHDEIGFSADNLQEFVHCLCYVHQRSTNAISIVAPIYYADLAAAQIAQFIKFDESENISSHNEFISQIPELPRLHERVADSMFFC 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02547 870 Pfam Piwi domain 529 836 IPR003165 GO:0003676
Mepo5g02547 870 FunFam Protein argonaute 3 596 870 - -
Mepo5g02547 870 Gene3D - 418 589 - -
Mepo5g02547 870 Coils Coil 267 287 - -
Mepo5g02547 870 FunFam Protein argonaute 7 234 358 - -
Mepo5g02547 870 Gene3D paz domain 233 358 - -
Mepo5g02547 870 SUPERFAMILY Ribonuclease H-like 527 834 IPR012337 -
Mepo5g02547 870 Pfam N-terminal domain of argonaute 27 177 IPR032474 -
Mepo5g02547 870 SMART DUF1785_2 187 239 IPR014811 -
Mepo5g02547 870 Pfam Argonaute linker 2 domain 380 424 IPR032472 -
Mepo5g02547 870 CDD PAZ_argonaute_like 239 353 - -
Mepo5g02547 870 Gene3D - 596 870 IPR036397 GO:0003676
Mepo5g02547 870 Pfam Argonaute linker 1 domain 189 235 IPR014811 -
Mepo5g02547 870 CDD Piwi_ago-like 398 830 IPR045246 -
Mepo5g02547 870 ProSiteProfiles PAZ domain profile. 280 354 IPR003100 GO:0005515
Mepo5g02547 870 ProSiteProfiles Piwi domain profile. 528 836 IPR003165 GO:0003676
Mepo5g02547 870 SMART Piwi_a_2 528 836 IPR003165 GO:0003676
Mepo5g02547 870 Pfam Mid domain of argonaute 434 476 IPR032473 -
Mepo5g02547 870 Pfam PAZ domain 243 370 IPR003100 GO:0005515
Mepo5g02547 870 SUPERFAMILY PAZ domain 234 394 IPR036085 GO:0005515
Mepo5g02547 870 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 22 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02547 Mepo-Chr5 30888340 30894529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02547 1 870 Eukaryotic Initiation Factors Gene Family AT5G43810 33.993 1.25e-152 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02547 K11593 - pop:7486850 1104.74