Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02538 ATGAATGCATCTAGCAATACATGTGAGATAGTGGAATACAGGGAAGAGATATTTCCTGAGTTCGAAACAGATGAAAAACCTCAGAGTAGTTGTTCCTACAAATCAGGAAAAAGGTACTCCATTGAAGATGATATTGATCGTCTTTTCAAGGCTATTGAGATTAAAAGTTCATCTAGAGGTCATAGTACATCGCGGTCGCAACAGAGTTCTCTTAAAAGGCCAATTAAAGTTTGTCCGTTTCAGGCTTCGGGAATTGGCATCGCGGAGCCTGTTAGTTTGAAGCAGGCACTTAGAGGATTGTGCATCTCTCAGGCATCAGAAATGGCTGCTTTGAAGAGAGTATCAAAGCAATGCAGCTCATCAAGAGTATCAGAGGTTGGCACGGTAAAGAAGTTGGTCGAAATCTCCCTAGTGCCAGAGATATCTACACCTTACGGTAAATTTCCGGAAGCAGCAATATCGAGTTCAAGTACTAATCATTCTATTGCTGTGGTCAACGCAACAAGCTTAAAAGAAATGACAACTAGGTTTGTGTCCCAAGATCAGATCGTTCCTCTTCCACCTGAGGTTGAAGCTGGCAAGCAAACGCTACAAACCGAGGAAGTGCTAGAGGTCAGAATGAATCCTGCTACGTCAAGTAAATCTTGTTTGAGTTCTTCAATGCCAGATAAGGACCGGGAGAAAAAATTTCATTGTGCATCTTGTCCACCTAGTTCTAGCAATGATAGTGGAGTGGGCAAAAACTCAAGCCTTAGTACATGTTTGGCAAAACCAATATTCAATAACATGAACTTCCTTAAGAAAAAGGTAAAGAAAGATCAATGTTCTGCCTCAAGCTGTGCTACTAGTAGTTTCAACAAGGAGAATGGAAATTCTGATCTTAAGCATGATATTAAAGAAAATGATGATAAACCATCTCCGTGCAGTTCAAATCATAGCATTGAGGTTAACTCAATTAATGTTAGTAGGGATTCAAATAAACCTGGTTTTAGTTTGAACTTCAGTAAAAAAACTAAGTTTCTTGTTACAAAAGTTGACGAAAAGTCAAGATCAAAGGAAAAGGGTGAGTTCTCTCAGAGCTCAAAAAGTAGCATGGGTGAGTATAGTACTAGTAGCACAAGTATCAGTGAAGAGAGCAATCTTAGTGGTTCGAGTCGCAGTGGCCAACGACCGCACATGTCAAAACACTCGAGATGGGAAGCTATTCGTGGGATTCAACAGCAGCATGGTAACTTAAATTTGAGGCACTTTAGGCTGATAAGGAAGCTTGGTAGTGGAGACATTGGAACCGTTTATCTTGCAGAACTAATTGGTACTAGTTGCCTTTTTGCACTGAAAGTTATGGACAATGAATTTTTGGCTAGCAGGAAGAAAACATTTAGAGTTCAAACTGAAAGAGAGATCCTTCAAATGTTGGATCATCCATTTCTTCCTACACTATATTCCCATATTACTACGACTAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGCGGTGATCTGCATGTGCTGCGACAGAAGCAAACGTACAAGAGCTTTTCGGAGCAAGCAGCTAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTCGAGTATTTGCACATGATGGGAGTTGTATATTGA 1623 0.4048 MNASSNTCEIVEYREEIFPEFETDEKPQSSCSYKSGKRYSIEDDIDRLFKAIEIKSSSRGHSTSRSQQSSLKRPIKVCPFQASGIGIAEPVSLKQALRGLCISQASEMAALKRVSKQCSSSRVSEVGTVKKLVEISLVPEISTPYGKFPEAAISSSSTNHSIAVVNATSLKEMTTRFVSQDQIVPLPPEVEAGKQTLQTEEVLEVRMNPATSSKSCLSSSMPDKDREKKFHCASCPPSSSNDSGVGKNSSLSTCLAKPIFNNMNFLKKKVKKDQCSASSCATSSFNKENGNSDLKHDIKENDDKPSPCSSNHSIEVNSINVSRDSNKPGFSLNFSKKTKFLVTKVDEKSRSKEKGEFSQSSKSSMGEYSTSSTSISEESNLSGSSRSGQRPHMSKHSRWEAIRGIQQQHGNLNLRHFRLIRKLGSGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKTFRVQTEREILQMLDHPFLPTLYSHITTTKLSCLVMEYCPGGDLHVLRQKQTYKSFSEQAARFYVAEVLLALEYLHMMGVVY 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02538 540 MobiDBLite consensus disorder prediction 290 306 - -
Mepo5g02538 540 SMART serkin_6 417 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02538 540 MobiDBLite consensus disorder prediction 351 397 - -
Mepo5g02538 540 FunFam Serine/threonine-protein kinase D6PK-like 415 500 - -
Mepo5g02538 540 MobiDBLite consensus disorder prediction 358 390 - -
Mepo5g02538 540 ProSiteProfiles Protein kinase domain profile. 417 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02538 540 MobiDBLite consensus disorder prediction 280 328 - -
Mepo5g02538 540 Gene3D Phosphorylase Kinase; domain 1 416 500 - -
Mepo5g02538 540 Pfam Protein kinase domain 418 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02538 540 MobiDBLite consensus disorder prediction 234 248 - -
Mepo5g02538 540 SUPERFAMILY Protein kinase-like (PK-like) 391 540 IPR011009 -
Mepo5g02538 540 MobiDBLite consensus disorder prediction 307 328 - -
Mepo5g02538 540 PANTHER FLIPPASE KINASE 1-RELATED 236 540 - -
Mepo5g02538 540 Gene3D Transferase(Phosphotransferase) domain 1 501 540 - -
Mepo5g02538 540 MobiDBLite consensus disorder prediction 227 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02538 Mepo-Chr5 30755182 30758240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02538 341 540 AGC Kinase Gene Family AT3G52890 70.500 7.68e-89 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo5g02538 Pkinase 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02538 - - gmx:100789339 728.783