Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02531 ATGTGCCAAAAACTTAACCAACTATTCTTCACAGTCTCTCTCTCTCTCTCTCTCTGCTATGTTCTGCTGAAACATATTCCAAATCAAACCAAAACCAAGCCTCAAAAGATGTCAATAGTACTAAGAAAACTGTTGGAATTAATCTTAAAACGCAATCCAACATCTTCACATGAACAACAACAACAACAAGAACAAGTGTTGCCGTTGCCGTGTGGTGATATGGGTGAATTAGATCAATTACCAAGTGATATCTTGGTGCAAATTTTGAGACTTTTGGGTCCCAAAGAAGTTGCAAAACTGAGTGTGATATGCAAGTCTTTGAAATTTTCTGTATCTGATAATCGTTTATGGCTTCACTTCCTTCAGACTCATCAATCTGATCCATCTTGGGATTCTGTGTTTTTTGCTGAAACTAATTTGACATCTGGTTACCCTCTTCCATCCTTTGGCCAGAGGCCCCAGCTGTCATTCAAACATATTTATGGTCAGAGAGCACAGGTTCCTGGTGCTATTATCATTGATGGCGGTTCCGGCTATTGCAAATTTGGTTGGAGCAAATATGCTTGTCCATCGGGGCGATCTGCAACATTTTTGGAATTTGGCAACATTGAGTCGCCAATGTATACTAGGCTTCGACATTTTTTCGCAACTATTTATAACAGGATGCAGGTGAAACCAAAAAATCAACCGGTTATTGTTTCTATACCAATATGCCATTATGATGATACTGAATCAGCCAGAGCATCGAGACAGCAACTTAAAGAAGCAATTTATGCTTCCCTGTTCGACTTGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGCAACTCTAGCTCTGTATGCTGCAAAACGAACTTCTGGAATAGCTGTTAATATAGGTTTTCAAGTGACATCAATAGTTCCAATTTTTAATGGTAAAGTAATGCGTAAGGTCGGTGTGGAAGTTGTGGGACTGGGAGCACTGAAAGTTACAGGATTTCTTAAGGAGAAGATGCAACAGAACAACCTAAATTTTCAATCATTGTACACTGTTCGTGCCTTGAAAGAGAATCTATGCTATGTTGCTCTTGATTATGAAGCTGAGCTATTAAAAGAAAACACACAAGCATCATTTCAAGCTACAGGAGATGGATTGTTTACACTTTCAAAAGAGCGGTTTCAGACAGCTGAGATTTTATTCAAGCCACATCTTGCTGGAGTGCAAGCCATGGGTTTACACCAGGCCATAGCTCGTTGTATGGAGAATTGTCATTCTGCAGGATTACCAGGCGACAACGATTGGTACAAAACTGTAGTTTTATCAGGAGGAACTGCATGTTTGCCAGGTTTGGCAGAAAGATTAGAGAAGGAACTCCATGGCTTACTTCCTCCATACATGTCCAATGGAATTAGAGTCATACCTCCTCCATACGGTGTCGATACTCAATGGTTCGGAGCAAAGATGATTGGCAATTTGAGCACATTTCCTGGTTCTTGGTGTGTGGAAAAAAAGAAGTTCCGCCAGAAGCCTAGGCTCGGCCTCATATGGTGA 1530 0.4078 MCQKLNQLFFTVSLSLSLCYVLLKHIPNQTKTKPQKMSIVLRKLLELILKRNPTSSHEQQQQQEQVLPLPCGDMGELDQLPSDILVQILRLLGPKEVAKLSVICKSLKFSVSDNRLWLHFLQTHQSDPSWDSVFFAETNLTSGYPLPSFGQRPQLSFKHIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSGRSATFLEFGNIESPMYTRLRHFFATIYNRMQVKPKNQPVIVSIPICHYDDTESARASRQQLKEAIYASLFDLNVPAVCAVNQATLALYAAKRTSGIAVNIGFQVTSIVPIFNGKVMRKVGVEVVGLGALKVTGFLKEKMQQNNLNFQSLYTVRALKENLCYVALDYEAELLKENTQASFQATGDGLFTLSKERFQTAEILFKPHLAGVQAMGLHQAIARCMENCHSAGLPGDNDWYKTVVLSGGTACLPGLAERLEKELHGLLPPYMSNGIRVIPPPYGVDTQWFGAKMIGNLSTFPGSWCVEKKKFRQKPRLGLIW 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02531 509 Gene3D - 67 144 - -
Mepo5g02531 509 SUPERFAMILY F-box domain 73 133 IPR036047 GO:0005515
Mepo5g02531 509 SUPERFAMILY Actin-like ATPase domain 284 493 IPR043129 -
Mepo5g02531 509 ProSiteProfiles F-box domain profile. 74 120 IPR001810 GO:0005515
Mepo5g02531 509 SUPERFAMILY Actin-like ATPase domain 169 290 IPR043129 -
Mepo5g02531 509 Pfam F-box domain 77 118 IPR001810 GO:0005515
Mepo5g02531 509 Gene3D - 213 500 - -
Mepo5g02531 509 SMART fbox_2 80 120 IPR001810 GO:0005515
Mepo5g02531 509 CDD NBD_sugar-kinase_HSP70_actin 171 315 - -
Mepo5g02531 509 SMART actin_3 168 499 IPR004000 -
Mepo5g02531 509 PANTHER ACTIN 212 499 IPR004000 -
Mepo5g02531 509 Pfam Actin 217 493 IPR004000 -
Mepo5g02531 509 Gene3D - 275 474 - -
Mepo5g02531 509 Gene3D Actin; Chain A, domain 4 318 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02531 Mepo-Chr5 30677559 30685138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02531 217 505 Cytoskeleton Gene Families AT3G12110 31.313 5.66e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02531 K16616 - gmx:100791973 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02531 5 30677559 30685138 Mepo5g02531 5 30677559 30685138 ECH