Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02528 ATGTCAAGTAATCAAAATCAAAATCCAAATCAAAATCAGTGTGAGAGTGAATCAAAATCAAACACAAACACAAACCCTTATCCTCCTCCAACCGCACCTTACTCTGATCTTGTTCGTGATTCTAATCTCTTCCAACAAAAGCTTCAATCTTTTCACGATTCGCTTGGTACCAAATTAAAGATTCCTACTATAGGGGGGAAACCACTAGATCTGCATCACCTCTTCGTTGAAGTAACATCTCGTGGTGGTATTGAAAAGGTAATTGTTGATCGTAAATGGAAGGAGGTAATAATGAGCTTCAACTTCCGAGATACCATAACAAGCGGATCATTCATGGTGCGCAAGACCTATCTATCGTTGCTTTATCACTTTGAGCAAGCGTATTATTTTCGCAAGCAAGTCCCTCCCTCAACACCTAATGCTTTGAGTGGGAACGTTGCCAATAGCTTCACAACCAATACGGACGGTGCTGCTATCAATGATTCACCTGTTCAGATAAGTCCAATTAGTCCAGCACAGACACTCGGTTCTTCACTGCGTGGAACAATTGACGGGAAATTTGATGACGGATATATAGTTACGGTGAACCTGGGTTCTGAACAGCTGAAAGGTGTCCTGTATCATGTTTCAAGTAATGCATCTAAGGGTTCTTCTATTGAAGGCAATAAAGAGCAATTGGGTTTATGTGGAGGAATCTGA 699 0.4106 MSSNQNQNPNQNQCESESKSNTNTNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSLGTKLKIPTIGGKPLDLHHLFVEVTSRGGIEKVIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLSLLYHFEQAYYFRKQVPPSTPNALSGNVANSFTTNTDGAAINDSPVQISPISPAQTLGSSLRGTIDGKFDDGYIVTVNLGSEQLKGVLYHVSSNASKGSSIEGNKEQLGLCGGI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02528 232 ProSiteProfiles ARID domain profile. 38 129 IPR001606 GO:0003677
Mepo5g02528 232 MobiDBLite consensus disorder prediction 1 36 - -
Mepo5g02528 232 SUPERFAMILY ARID-like 38 137 IPR036431 GO:0003677
Mepo5g02528 232 Gene3D - 34 145 IPR036431 GO:0003677
Mepo5g02528 232 SMART ARID_2 35 125 - -
Mepo5g02528 232 SMART bright_3 39 130 IPR001606 GO:0003677
Mepo5g02528 232 MobiDBLite consensus disorder prediction 1 25 - -
Mepo5g02528 232 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 2 219 - -
Mepo5g02528 232 CDD ARID_HMGB9-like 40 125 IPR045303 GO:0003677
Mepo5g02528 232 Pfam ARID/BRIGHT DNA binding domain 42 125 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02528 Mepo-Chr5 30631561 30637549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02528 32 215 ARID Transcription Factor Family AT3G13350 49.462 2.25e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mepo5g02528 ARID 1.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02528 - - mtr:11414168 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02528 5 30631561 30637549 Mepo5g02528 5 30631561 30637549 ECH