Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02517 ATGCCGGAAAACGATCAACTTCGTCTTCTAGGTTCATTAGAAGATGCAGAACGAGACATTGAAGCTCATGGAACGGAACACGTCGCCGGAGTTAATGGCGGTGGTGGTAGTGGGAGTGGTAAAGGGTTGAGAGATATGTTGAAATTATCAGGTCATCATCGACATAGTTTTAAGCGTTTAGAGAGAGAAAGAGAAAGAGAAAGAGATCGTGATGTTGATAATAATAATGTGCGTGATTCTTCTCACTCTGAGTTTGATCTTCATTCATTTGATTCTTCTGGTGATGTTCTTGCTGATAGTGCACCTCCTGAATGGGCTTTGTTGCTCCTTGGTTGTCTCCTTGGTCTTGCCACTGGTCTCCTTGTTGCTGCTTTCAATAAAGGGGTGCATGTAATACATGAATGGGTATGGGCTGGTACTCCGAATGAGGGTGCTGCCTGGCTTCGTTTGCAGAGATTGGGTGATACATGGCATAGAATCCTTTTGATACCTGTAACCGGAGGAGTCATGGTTGGCATGATGTGTGGTTTACTAGAAATATTGGATCAAATAAAGCAGGCAAGTTATTCCCCTCAAAGACAAGGTTTTGACTTGCTTGCAGGAATCTATCCAACGGTAAAGGCTATTCAAGCCGCAGTTACTTTAGGTACTGGCTGTTCATTGGGTCCTGAAGGTCCTAGTGTTGATATCGGAAAGTCGTGCGCCAATGGATTCTCATTAATGATGGAAAACAATAGAGAAAGAAAAATAGCACTTGTTGCAGCTGGTGCAGCAGCTGGAATTTCTTCAGGCTTCAATGCAGCAGTTGCAGGCTGTTTTTTCGCTATTGAAACTGTGCTGAGGCCTCTTCGTGCAGAGAATTCTCCTCCATTTACAACTGCCATGATTATATTGGCTTCTGTTATTTCATCAACTGTATCAAATGTCTTACAGGGATCCCAATCAGCTTTTACAGTGCCCGAGTACGAGTTGAAATCTGCTGCTGAGCTACCTTTATACCTGATATTAGGAATGCTGTGTGGCGTTGTAAGCGTGGCAATGACTCGTTTGGTTGCTTGGTTCACCAAGTTTTTTGACTATATCCAGGAGAAATTCGGCCTTCCTACTGTAGTCTGCCCTGCCATAGGTGGTTTAGGAGCTGGGATCATTGCCCTTAAATATCCCGGAATATTATACTGGGGTTTCACAAATGTGGAAGAAATTCTACGTACTGGAAAGAGTGCTTCTGCTCCTGGAATATGGCTTCTAACTCAATTAGCAGGTGCTAAGGTTATTGCCACAGCTCTTTGCAAGGGCTCTGGGCTTGTAGGTGGTCTTTACGCACCGAGTTTAATGATTGGGGCTGCAGTTGGTGCTGTGTTTGGAGGCTTTGCTGCAGAAGTTATCAATTCAGCAATTCCTGGAAATGCTGCTGTTGCACAACCCCAGGCTTATGCTCTGGTTGGAATGGCTGCTACACTAGCATCTGTCTGTTCTGTTCCTTTGACTTCAGTTCTACTTCTGTTTGAGCTCACAAAAGATTATAGAATACTGCTTCCTCTCATGGGGGCTGTTGGGCTGGCCATTTGGGTTCCCTCAGTGACAAATCAGGGGAAGGAGAGTGATCCACCTGGTAAAAGAAATTTGGCGAGAGGATATTCTTCAGTTTCAAATAATGAAGATGATGATGGGAATGGTTTAGAACTCTGCATTGTTGGAGATGGTTCCGAGCTTGAAGAAATCGATGAAGAACTATTTCTGGACAAACTTAAGGTTTCTCAGGCCATGTCGAAATACTATCTGAAGGTTCCATCATCTGTAACCCTCAAAGATGCAATCAAAATCATGCATGACAGCCAGCAAAACTGTGTGCTGGTAGTTGACGAAGATGATTTTCTTGAAGGGATATTAACATATGGTGACATTAGAAGGTGTCGATCCGAGAAGTCTAATGAGACTTCTAAGAGTGACTCAGATCCTTTGGATGTGAACACATTGCTTGTTTCCTCTGTTTGTACTCGAGGAATGAGCTATCGTGGACGAGCACGTGGACTTTTAACTTGTTATCCAAATACTAGTTTGGCCACAGCCAGAGAGTTGATGGAGGCCAAGGGCGTTAAGCAATTACCAGTAGTTAAACGTGGTGGAAATCACATTAGAGAGAGGAAGCGAAGAATTGTCGGTCTCCTTCATTATGATGAACTATGGCACTGTCTCAGGAAAGAGATTAACCACAGAAAGTTAGATTTTCAAAGTAGAACAGAAAACAATTTGACAAATGGGCATTAA 2268 0.4343 MPENDQLRLLGSLEDAERDIEAHGTEHVAGVNGGGGSGSGKGLRDMLKLSGHHRHSFKRLERERERERDRDVDNNNVRDSSHSEFDLHSFDSSGDVLADSAPPEWALLLLGCLLGLATGLLVAAFNKGVHVIHEWVWAGTPNEGAAWLRLQRLGDTWHRILLIPVTGGVMVGMMCGLLEILDQIKQASYSPQRQGFDLLAGIYPTVKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNRERKIALVAAGAAAGISSGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNVLQGSQSAFTVPEYELKSAAELPLYLILGMLCGVVSVAMTRLVAWFTKFFDYIQEKFGLPTVVCPAIGGLGAGIIALKYPGILYWGFTNVEEILRTGKSASAPGIWLLTQLAGAKVIATALCKGSGLVGGLYAPSLMIGAAVGAVFGGFAAEVINSAIPGNAAVAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVTNQGKESDPPGKRNLARGYSSVSNNEDDDGNGLELCIVGDGSELEEIDEELFLDKLKVSQAMSKYYLKVPSSVTLKDAIKIMHDSQQNCVLVVDEDDFLEGILTYGDIRRCRSEKSNETSKSDSDPLDVNTLLVSSVCTRGMSYRGRARGLLTCYPNTSLATARELMEAKGVKQLPVVKRGGNHIRERKRRIVGLLHYDELWHCLRKEINHRKLDFQSRTENNLTNGH 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02517 755 ProSiteProfiles CBS domain profile. 669 741 IPR000644 -
Mepo5g02517 755 ProSiteProfiles CBS domain profile. 589 646 IPR000644 -
Mepo5g02517 755 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 62 741 - -
Mepo5g02517 755 PRINTS Chloride channel signature 476 492 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g02517 755 PRINTS Chloride channel signature 494 513 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g02517 755 PRINTS Chloride channel signature 207 226 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g02517 755 PRINTS Chloride channel signature 258 277 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g02517 755 PRINTS Chloride channel signature 435 455 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g02517 755 MobiDBLite consensus disorder prediction 24 84 - -
Mepo5g02517 755 FunFam Chloride channel protein 95 540 - -
Mepo5g02517 755 MobiDBLite consensus disorder prediction 529 554 - -
Mepo5g02517 755 FunFam Chloride channel protein 570 729 - -
Mepo5g02517 755 SUPERFAMILY Clc chloride channel 102 528 IPR014743 -
Mepo5g02517 755 Gene3D - 570 732 IPR046342 -
Mepo5g02517 755 CDD Voltage_gated_ClC 122 521 - -
Mepo5g02517 755 MobiDBLite consensus disorder prediction 46 84 - -
Mepo5g02517 755 Pfam Voltage gated chloride channel 201 524 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo5g02517 755 SUPERFAMILY CBS-domain pair 583 737 IPR046342 -
Mepo5g02517 755 CDD CBS_pair_voltage-gated_CLC_euk_bac 589 729 - -
Mepo5g02517 755 Pfam CBS domain 585 637 IPR000644 -
Mepo5g02517 755 Pfam CBS domain 677 725 IPR000644 -
Mepo5g02517 755 Gene3D Clc chloride channel 95 535 - -
Mepo5g02517 755 SMART cbs_1 592 640 IPR000644 -
Mepo5g02517 755 SMART cbs_1 677 733 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02517 Mepo-Chr5 30450776 30459233 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02517 K03281 - gmx:100787625 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02517 5 30450776 30459233 Mepo5g02517 5 30450776 30459233 ECH