Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02493 ATGGCAATCAAACATCAAGGAAACAATTCCCTCTTGAAACATTGTTGTTCATCAAGACGTGTAATAACCTTGATACAAAAGGTGACTGCAGAAGTTATTGGTACATATTTTCTAGTGTTTGCTGGGTGTGGGGCTGTAGCAGTGAATAAAATACATGGCTCTATCACTTTTCCAGGGATTTGCATCACTTGGGGATTGATTGTAACAGTCATGTGTTACTCAGTTGGTCATATCTCTGGAGGCCTCTTCAACCCTGCTGTTACAATCACCTGGGCTATCTTTCGCCGGATCACGGTTAAAGAGGCTCCTTTGTACATTGTTGCTCAGTTACTTGGGTCTATACTTGCAAGTGTAACATTATCTCTAATGTATGATATCACACCCGAATCTTATTTCGGAACTGTACCGGTCGGATCAAATGGTCAATCTTTAGTGTTAGAAATAATTATCAGTTTTCTCTTAATGTTTGTCATTTCAGCTGTTACTACAGATGATAGAGCGGTCGATGACTCGGCAAGTATTGCAGTTGGAATGACTTTAACATTGAATCTTTTCATTGCTGGGCCTGTATCAGGTGCATCTATGAACCCAGCAAGAAGTATTGGTCCTGCAATTGTGATACATATTTACACAGGATTGTGGGTATATATAGTTGGTCCAATTATTGGAGCCATAGCTGGAGCACTTGCCTATAACTTTCTTAGATCAGCATACAAGCCAACTTCAGAGACAACAGCAGACAAGCCACCTTCAGAATTAACAGCAGACAAGTTAACAGCAGAAACACCAAATATTGTGTAA 801 0.4007 MAIKHQGNNSLLKHCCSSRRVITLIQKVTAEVIGTYFLVFAGCGAVAVNKIHGSITFPGICITWGLIVTVMCYSVGHISGGLFNPAVTITWAIFRRITVKEAPLYIVAQLLGSILASVTLSLMYDITPESYFGTVPVGSNGQSLVLEIIISFLLMFVISAVTTDDRAVDDSASIAVGMTLTLNLFIAGPVSGASMNPARSIGPAIVIHIYTGLWVYIVGPIIGAIAGALAYNFLRSAYKPTSETTADKPPSELTADKLTAETPNIV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02493 266 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 CDD MIP 26 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 SUPERFAMILY Aquaporin-like 20 242 IPR023271 -
Mepo5g02493 266 PANTHER AQUAPORIN NIP2-1 16 240 IPR034294 -
Mepo5g02493 266 NCBIfam MIP family channel protein 30 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 Gene3D Glycerol uptake facilitator protein. 2 248 IPR023271 -
Mepo5g02493 266 Pfam Major intrinsic protein 22 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g02493 266 MobiDBLite consensus disorder prediction 241 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02493 Mepo-Chr5 30168960 30170054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02493 16 264 Major Intrinsic Protein MIP AT5G37820 60.000 5.21e-105 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02493 K09874 - gmx:100791338 345.895