Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02487 ATGCATGAAAGGAAGCTTTTGCAGTCTAAGTCTCCAGTAAAGTTCAATCTTGTGGTGGCAAAAGATGGTTCTGGACAGTACAAGACTGTGCAAGCTGCTTTGAATGCTGCTGCTAAGAGAAAATATAAGACAAGGTTTGTGATACATGTGAAGAAAGGTGTTTATAGAGAGAACATTGAAGTTGCTGTCCACAATGACAACATTATGTTGGTTGGTGATGGAATGCAAAATACCATAATAACAAGCTCTAGAAGTGTTCAAGGAGGTTTTACCACTTACAGCTCTGCAACAGCAGGCATTGATGGACTTCATTTCATTGCACGTGACATAACTTTCCAAAATACCGCTGGTCCTCACAAGGGTCAAGCTGTAGCGCTCCGATCAGCCTCCGATCTCTCTGTCTTCTACCGGTGTGCTATATCGGGTTACCAAGACACTCTGATGGCTCATGCACAACGTCAATTCTACCGACAATGCTTCATTTATGGCACCGTAGACTTCATCTTTGGCAACGCCGCAGTAGTATTCCAAAACTGTAACATTTTCGCAAGAAAACCTTTAGATGGCCAAGCTAACATGATCACGGCCCAAGGTCGTGGTGACCCATTCCAAAACACTGGAATTTCATTTCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGCCTGTTGTTGACAAGTACAAAACCTTCTTGGGCAGGCCTTGGCAACAATATTCAAGAGTTATGGTGATGAAAACTTTTATGGACACTTTAGTCAGCCCCCTAGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGACACATTGTATTATGGAGAGTATCAGAATTATGGACCTGGTTCATCAACAGCAAATAGAGTAAAATGGCCTGGTTATCATGTGATAACAAACCCTAATGAAGCATCAAAGTTTACGGTTGCTGGACTCCTTGCTGGTCCAACATGGTTGGCTACCACTTCTGTGCCATTTACATCTGGTCTTTGA 990 0.4283 MHERKLLQSKSPVKFNLVVAKDGSGQYKTVQAALNAAAKRKYKTRFVIHVKKGVYRENIEVAVHNDNIMLVGDGMQNTIITSSRSVQGGFTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPLGWSPWGDTDFAQDTLYYGEYQNYGPGSSTANRVKWPGYHVITNPNEASKFTVAGLLAGPTWLATTSVPFTSGL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02487 329 PANTHER PECTINESTERASE 5 319 - -
Mepo5g02487 329 SUPERFAMILY Pectin lyase-like 12 328 IPR011050 -
Mepo5g02487 329 Gene3D - 10 329 IPR012334 -
Mepo5g02487 329 FunFam Pectinesterase 10 329 - -
Mepo5g02487 329 ProSitePatterns Pectinesterase signature 2. 161 170 IPR033131 -
Mepo5g02487 329 Pfam Pectinesterase 16 314 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02487 Mepo-Chr5 30098497 30100008 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02487 3 329 Carbohydrate Esterase AT5G51500 65.957 5.81e-160 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02487 K01051 - gmx:100806133 590.497