Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02481 ATGGACCTGAAGACAAATCATGCTCCTCGCATTGCTGATACTGCAACCTTAACAAGGACAAGATCAAGGCTCGGCGCAGGCTCGCCTTCGAGTCTGTCATGCTCTCCTACAAATACTTCAACTTTTCTGCATGGTCCATCGCTAACGATTCCACGGAAGAAGATAGGAATTCTCGATGATGTTCGTTCTAATGGTTGGCTTGATGCAATGAGATCGTCGTCTCCTACTCACAAGAAAATATCTATGGATATTGGTCATGGTGTTGCATCTTCTGAAGCCGATGCTGCTTATTTAACCTGGCTGCTAGAGTTTCCATCAGCAATTGGGGCCTTTGAACAAATTACTAACCTTGCTAAAGGCAAGAAAATAGCACTGTTTCTTGATTACGATGGGACTCTTTCGCCAATTGTTGACAATCCTGAGCGTGCTTTCATGTCCGACAACATGCGCGCTGCTGTGAAAAGTGTGGCAGAGTATTTTCCGACTGCCATAATTAGCGGAAGAAGCCGTGAAAAGGTACATGAATTTGTTGGATTAACAGATCTCCATTATGCTGGTAGTCATGGAATGGACATAATTGGTCCTCTTAGACAGTCTGTATCTGATAATCACCCTAATTGCATTAGGTCTACTGATAAGAAGGGCAAGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCTATGATTGATGAGGTACGTAAGTTGCTCACCGAGTGTACAAAAGACATCAAAGGAGCGAAAATTGAGAACAATAAGTTTTGTGTGTCTGTACATTATCGTAATGTAGACGAGGAGAGTTGGGATTTGGTGGCACAACGCGTTTTTGATATTATGAAGGACTATCCACATTTACGATTGACTCATGGTCGGAAGGTTTTAGAGGTTCGACCAGTGATTGACTGGGATAAGGGAAAAGCTGTTACATTTTTGCTCGAATCACTTGGACTTAACGACGACGACGATGTGCTAGCTATATATATTGGTGACGATCGGACTGATGAAGATGCATTTAAGGTTTTGAGTGAGGTTAACAAAGGTTTTGGAATCTTAGTCTCTTCCGCCCCTAAAGAAAGCAACGCGGTTTACTCTCTTTCTGATCCTTCAGAGGTAATTCTTATGGTTGTAATTTAG 1137 0.4239 MDLKTNHAPRIADTATLTRTRSRLGAGSPSSLSCSPTNTSTFLHGPSLTIPRKKIGILDDVRSNGWLDAMRSSSPTHKKISMDIGHGVASSEADAAYLTWLLEFPSAIGAFEQITNLAKGKKIALFLDYDGTLSPIVDNPERAFMSDNMRAAVKSVAEYFPTAIISGRSREKVHEFVGLTDLHYAGSHGMDIIGPLRQSVSDNHPNCIRSTDKKGKEVNLFQPAAEFLPMIDEVRKLLTECTKDIKGAKIENNKFCVSVHYRNVDEESWDLVAQRVFDIMKDYPHLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLNDDDDVLAIYIGDDRTDEDAFKVLSEVNKGFGILVSSAPKESNAVYSLSDPSEVILMVVI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02481 378 SUPERFAMILY HAD-like 124 374 IPR036412 -
Mepo5g02481 378 NCBIfam trehalose-phosphatase 120 373 IPR003337 GO:0003824|GO:0005992
Mepo5g02481 378 Pfam Trehalose-phosphatase 126 370 IPR003337 GO:0003824|GO:0005992
Mepo5g02481 378 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 41 372 IPR044651 GO:0004805|GO:0005992
Mepo5g02481 378 CDD HAD_TPP 124 374 - -
Mepo5g02481 378 NCBIfam HAD-IIB family hydrolase 125 342 IPR006379 -
Mepo5g02481 378 Gene3D - 206 300 - -
Mepo5g02481 378 FunFam Trehalose 6-phosphate phosphatase 230 377 - -
Mepo5g02481 378 FunFam Trehalose 6-phosphate phosphatase 224 300 - -
Mepo5g02481 378 Gene3D - 125 366 IPR023214 -
Mepo5g02481 378 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02481 Mepo-Chr5 30035729 30039784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02481 114 376 Trehalose Biosynthesis Gene Families AT1G23870 25.177 7.55e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02481 K01087 - gmx:100819495 567.77