Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02461 ATGGATAGGGTTCAGGAGGGAGAAGAAAATAATAAATCATCAGTTGTTGGTCTAGCAATCAAGGGTAACAAGAAAAGCAAATATGTTGTACAATGGGCACTTGATAAATTTGTTCATGAAGGGATAAGTATCTTCAAGCTTATACATGTCAGGGCTGTTATTAAAGGAGTTCCAACACCAATGGGAGATGTGCTACCTCTTTCACAAGTACGCAATGACGTAGCAACTTCTTTTAAAAGGGAAGTGGAGTGGCAAACAAATCAAATGCTTCTACCTTTTAAGAGTTTGTGTGAGCAGAGAAAGGTGCACGTAGATGTTATAGTGATTGAATCTGATGATGTAGCAACTGCAGTAGCAGAGGAAGTAGCAAGGGATGCTATTACCAAACTTGTCCTTGGAGCTTCATCTTCTGGTATATTTAAAAGTAAGCATAAGGGCATTTCTGCAAAAATATCGGTATGTACTCCAAGATTTTGTACAGTTTATGCCGTTGCCAAAGGAAAATTGTCCATACGGCCGTCAGACACGGAGATTGATGGAAGTATTATAGATAATACCAGTGAAACCAGTTTTTCCTCCAGCAGCTCATCAAACTACACTTCCACCTCTCAGGCAGATTCTGGATCAGTTGCATCATGTAATGCTTTACATTCCTACGCCAAGGAAACACGGCGAGTTAAAGCTCACTCAAGTATAGATCAGACCCTTCTAAGAACAAGTCCTAGTCTAAATGAAACTAATTATTTTAGAGGTCACTCCCTAGATCTTGGGAGAAAGAATGCTGCTGCAAGTTCTTCCAGAAACTATGATATCGACCATGCTCTAAGTCAGGCCTCTAGTTGCGGAAGCATTTCAGATACTGAATCTTTCTTTTATGAACAAAATTATGCCAAGGATGCGACACAAGTTAATAGACTTCCACCATCAAATAGGCAGGAAAACATTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCGCAAGGAATGCATGCAGTAGCTCAAAGTGAGAACATTGATGCATCACAAAAGTTGAATGAACTAAACAAGAGAAGATTAGAAGAATCCACAAAAATGAAGGAGATTATGGCTAAGGAGGAGATGGCCATGGAATTAGCGAATCAAGAAAGAGAGAAATATGAAGCTGCAGCAAGAGAAGCTACATATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGAGCGAAAAGAAACAGAATTTAAAGCTATCCGTGCTGCCAAAGAGAAAGAAAAACTTGAGGATGCTCTGAGTGGTTCCACGCCTCAGTACCGGACGTTTACGTGGGATGAAATAGTTTCGGCTACTTCATCTTTCTCTGAAGATTTGAGAATTGGAATGGGTGCATATGGAATTGTGTATAAGTGCACTTTGCATCACACAACTGTAGCTGTTAAAGTTCTCCATTCTACTGGAAACTGCAAAAGCAAGCAATTCCAACAAGAGTTAGAGATATTGAGCAGAATTCATCATCCAAACTTGCTTCTTCTTCTCGGTGCATGTCCTGATCACGGATGCCTTGTGTATGAATACATGGAAAATGGTAACTTGGAGGATAGACTACTCCAGAAAAACAGTAATAGCCCAATCCCATGGTTTGATAGGTTTAGAATAGCTTGGGAAGTTGCGTCAGCTCTTTCCTTTCTTCACAGCTCAAAGCCACAACCAATCATCCATCGTGACTTGAAACCCGCAAACATCTTGCTTGGTGGTAACCTTGTCAGCAAGATTGGTGATGTTGGCCTTTGTACAATCCTTGATTCAGATGAATTATCTGCCATGTATAAGGACACAGCGCCTGTTGGAACACTCAGCTACATTGATCCTGAGTATCAAAGGAGTGGTTTAATATCTACAAAATCTGATGTTTATGCTTTTGGATTAGTGATCTTACAGTTATTGACGGCAAAACCAGCCGTAGCACTTACTCATATAGTTGAAACAGCTATTGATGGTGGTAATTTAGCAGATATATTGGATCCAAAAGCAGGATCATGGCCACTACAAGAGACACTAGACATAGCTCGGTTAGCATTAGGCTGTGCGGAGATGCGGCGTAAGGATCGGCCTGATTTGAATGACCATGTCCTACCAATGCTAGAGAGGTTGAAAGAAGTTGCTGATAAGGCTCAATATTCTGCTTCAATAGTTACTATAAAATCCAGACCTCCAAACCATTTTATATGCCCTATACTTCAGGATGTGATGGACGATCCTTGTGTTGCTGCAGATGGATATACGTACGATCGTAATGCAATTGAAAAGTGGCTTGAGGAGAATGACAAATCACCAATGACAAATATGGTTTTACCTCATAAGCATCTAATTCCTAATTACACACTTCTTTCTGCAATTTTGGAGTGGAAGACCTGA 2394 0.4031 MDRVQEGEENNKSSVVGLAIKGNKKSKYVVQWALDKFVHEGISIFKLIHVRAVIKGVPTPMGDVLPLSQVRNDVATSFKREVEWQTNQMLLPFKSLCEQRKVHVDVIVIESDDVATAVAEEVARDAITKLVLGASSSGIFKSKHKGISAKISVCTPRFCTVYAVAKGKLSIRPSDTEIDGSIIDNTSETSFSSSSSSNYTSTSQADSGSVASCNALHSYAKETRRVKAHSSIDQTLLRTSPSLNETNYFRGHSLDLGRKNAAASSSRNYDIDHALSQASSCGSISDTESFFYEQNYAKDATQVNRLPPSNRQENINLELEKLRIELRHAQGMHAVAQSENIDASQKLNELNKRRLEESTKMKEIMAKEEMAMELANQEREKYEAAAREATYLKECAEREAAERKETEFKAIRAAKEKEKLEDALSGSTPQYRTFTWDEIVSATSSFSEDLRIGMGAYGIVYKCTLHHTTVAVKVLHSTGNCKSKQFQQELEILSRIHHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLQKNSNSPIPWFDRFRIAWEVASALSFLHSSKPQPIIHRDLKPANILLGGNLVSKIGDVGLCTILDSDELSAMYKDTAPVGTLSYIDPEYQRSGLISTKSDVYAFGLVILQLLTAKPAVALTHIVETAIDGGNLADILDPKAGSWPLQETLDIARLALGCAEMRRKDRPDLNDHVLPMLERLKEVADKAQYSASIVTIKSRPPNHFICPILQDVMDDPCVAADGYTYDRNAIEKWLEENDKSPMTNMVLPHKHLIPNYTLLSAILEWKT 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02461 797 Coils Coil 401 423 - -
Mepo5g02461 797 CDD STK_N 15 167 - -
Mepo5g02461 797 Coils Coil 312 399 - -
Mepo5g02461 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Mepo5g02461 797 ProSiteProfiles U-box domain profile. 729 797 IPR003613 GO:0004842|GO:0016567
Mepo5g02461 797 Pfam Protein tyrosine and serine/threonine kinase 451 700 IPR001245 GO:0004672|GO:0006468
Mepo5g02461 797 ProSitePatterns Protein kinases ATP-binding region signature. 452 473 IPR017441 GO:0005524
Mepo5g02461 797 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 729 797 IPR013083 -
Mepo5g02461 797 ProSiteProfiles Protein kinase domain profile. 446 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02461 797 Pfam U-box domain 731 796 IPR003613 GO:0004842|GO:0016567
Mepo5g02461 797 SUPERFAMILY Protein kinase-like (PK-like) 428 701 IPR011009 -
Mepo5g02461 797 CDD RING-Ubox_WDSUB1-like 731 785 - -
Mepo5g02461 797 Gene3D HUPs 8 146 IPR014729 -
Mepo5g02461 797 SUPERFAMILY RING/U-box 728 796 - -
Mepo5g02461 797 Gene3D Phosphorylase Kinase; domain 1 414 518 - -
Mepo5g02461 797 PANTHER OS02G0152300 PROTEIN 16 793 - -
Mepo5g02461 797 Gene3D Transferase(Phosphotransferase) domain 1 519 728 - -
Mepo5g02461 797 SMART serkin_6 446 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02461 797 MobiDBLite consensus disorder prediction 187 208 - -
Mepo5g02461 797 SMART Ubox_2 733 795 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02461 Mepo-Chr5 29781371 29787255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02461 13 797 U-box Gene Family AT4G25160 52.934 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mepo5g02461 PK_Tyr_Ser-Thr 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02461 - - gsj:114409387 1167.53