Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02438 ATGTCTGTTCTCATTCGAACAATTCAAAGAGCTCATAATGTTCTCTCTCAAACATTAGGTTATGGTAACAGCAGAACTTACATTGCAGAATCAGTTACCAAATCACCTTTTGAATCCAACATTTTGCGAATTATCCGAAATGAAATGGAATTCCTAGCTGATATCGCTCCTCCACACCAGGCTTACGAGAAGAAACTGTTGAATAATCCATTGAGAGATATCAAAGTGCAAAAGCTTGTACTCAACATCTCTGTTGGTGGTGAAAGTAGAGATCGTCTCACCAGAGCCGCCATGGTTCTTCACCACCTTAGCGGTCAAACCCCTGTTCTCTCTAAAGCTAAGCACACCGTCCGTTCCTTTGGTAATAGAAGGAATGAAAAGATTGCTTGCTACGTCACTGTTAGAGGCGACAAGGCATTGCAGCTTTTGGAGAGCGGTTTGAAGGTCAAGGAATATAAACTGTTGAGCAGAAATTTCAGTGATACCGGTTGTTTTGGCTTCGGTATTCAGGATCATATTGAATTGGGATTCAAGTATGATCCTTCTATTGGTATTTATGGAATGAATTTCTTTGTTGCCTTGGAGCGCCCTGGTAATCGTGTGGGACGTCGTCCCCGTTGCAAGGCACGTCTTGGAATCCAGCATCGTGTCACAAAGGATGATGCCATGAAGTGGTTCCAGGGTAAATATGAAGCCCAGATATGTAACACGGTTCGGAGGCTGTGGGATAACCGGAGTGCTTCACAAGTCAACAATGGCAATGATGAAGTTAGCAGTAGCAGAGACGTAATGCAGCAGAGTTCTCCCAATGTACGGGCAAGGAGCGTCTGTTTAGGTTTATTTGGGTTATCAACTAGAAATGCTTGTTCACGAAGGAGAGGCTTTTCGCTTGTTGGAAGCAGTACATTGGGTGCAACAGATGGGACTTCACAATATCACGTTTCAAAGCAACTTGCAAATCTTTGTTGA 969 0.4345 MSVLIRTIQRAHNVLSQTLGYGNSRTYIAESVTKSPFESNILRIIRNEMEFLADIAPPHQAYEKKLLNNPLRDIKVQKLVLNISVGGESRDRLTRAAMVLHHLSGQTPVLSKAKHTVRSFGNRRNEKIACYVTVRGDKALQLLESGLKVKEYKLLSRNFSDTGCFGFGIQDHIELGFKYDPSIGIYGMNFFVALERPGNRVGRRPRCKARLGIQHRVTKDDAMKWFQGKYEAQICNTVRRLWDNRSASQVNNGNDEVSSSRDVMQQSSPNVRARSVCLGLFGLSTRNACSRRRGFSLVGSSTLGATDGTSQYHVSKQLANLC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02438 322 FunFam 60S ribosomal protein L11 62 235 - -
Mepo5g02438 322 Pfam ribosomal L5P family C-terminus 127 225 IPR031309 -
Mepo5g02438 322 SUPERFAMILY RL5-like 69 233 IPR022803 -
Mepo5g02438 322 ProSitePatterns Ribosomal protein L5 signature. 100 116 IPR020929 GO:0003735|GO:0005840|GO:0006412
Mepo5g02438 322 Gene3D - 61 238 IPR022803 -
Mepo5g02438 322 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 60 236 IPR002132 GO:0003735|GO:0005840|GO:0006412
Mepo5g02438 322 Pfam Ribosomal protein L5 69 123 IPR031310 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02438 Mepo-Chr5 29571085 29575415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02438 61 236 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 81.250 8.27e-101 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02438 K02868 - ini:109155933 285.804