Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02402 ATGGAATCCAGATTAGTTGATGGAAGTGATGGGGCGGAAGTTTCTGCGGATGGTAATTTGGTGGAACCGAATGATGGGTGTAGATCGGCAAATAGTTATTCTGGGAGAGAGTTGGGTATCTCTGATTATGACCATGCTATTAAGGAACCATATGAAGGCATGGAATTTGTATCCGAAGATGCTGCTAAGATATTTTATGATGAATATGCCCGACATGTAGGATTTGTCATGCGTGTGATGTCTTGTCGGCGCTCAGAAAGAGATGGAAGGATTCTCGCCCGCAGGTTTGGATGTAATAAGGAGGGTCATTGTGTCAGCATACAAGGGAAACTTGGTCCAGTTCGTAAACCTAGGACCAGCACTAGAGAAGGTTGTAAGGCAATGATTCATATCAAGTATGATCAGTCCGGAAAATGGGTGATAACAAAGTTTGTGAAAGATCATAATCATCCACTAGTAATCTCTCCACGCGAAGCACGCCAAACAATGGACGAGAAGGATAAGAAAATTCAGGAACTAACATTAGAGCTTCGGATTAAAAAACGGTTGTGTGTAACATATCAAGAACAGTTAAAGTGTTTTATGAATATTGTCGAAGAGCACAGTGACAAGCTGTCTGCAAGAGTTCATCACATACTTGATAATCTTAAAGAATATGAATCCATAGAAGAGCTTTTGCACCAGACGTAG 690 0.4116 MESRLVDGSDGAEVSADGNLVEPNDGCRSANSYSGRELGISDYDHAIKEPYEGMEFVSEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRFGCNKEGHCVSIQGKLGPVRKPRTSTREGCKAMIHIKYDQSGKWVITKFVKDHNHPLVISPREARQTMDEKDKKIQELTLELRIKKRLCVTYQEQLKCFMNIVEEHSDKLSARVHHILDNLKEYESIEELLHQT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02402 229 MobiDBLite consensus disorder prediction 1 26 - -
Mepo5g02402 229 Pfam FAR1 DNA-binding domain 65 153 IPR004330 -
Mepo5g02402 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 221 - -
Mepo5g02402 229 Coils Coil 163 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02402 Mepo-Chr5 29137073 29142038 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mepo5g02402 FAR1 7.6e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02402 - - pvu:PHAVU_005G002900g 368.622