Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02398 ATGGCTTCCATCACAGATAGATTCAAGTATGATGTTTTCATCAGTTTCAGAGGTGAGGATACTCGCTATGGTTTCACCGGCTATCTCAAGAAAGCTCTTGATGACAAAGGAGTTCGAACTTTCATGGATGACGACGAGCTTCAAAAAGGAGAAGAAATTACACCATCACTTCTCAAAGCAATTGAAGACTCTATGATGGCCATTGTTGTTCTCTCCAAGAATTATGCTTCTTCTTCATTTTGCTTACAAGAATTTTCAAAGATCCTCGATTCTATGATGAAAGATAAGGCTCGTTCCATTCTGCCGATTTTTTATAAGGTTGATCCTTCTGATGTACGAAAGTTGAAAAGGACTTATGGATGGAAATTGACTAGGGTCGAAGAAATACTACATGCTCATTATGGTGATATCATGAACGATCACATCAATGTGTTGGTGGAAAAATCTCTCATAAAAATAAGTGATTCTGGTAATGTGACATTACATGATTTAGTAGAGGATATGGGGAAAGAAATTGTTAGACAAGAATCACCTGAAGATCCTGGAAAACGAAGTCGGTTATGGTCTTCTAAAGATATAATTAAAGTTTTACAAGAAAATACAGGAACAAGTAAAATTGAAATCATACATTTCGGCTGTTGGATAAAGGTAGAATGGGATGGAGAAGCTTTCTTGAAGATGGAAAATCTCAAAACACTAATTTTTAGTAATGATGTTTCTTTTTCTACAAATCCTAAACATCTTCCAAATAGTCTAAGAGTGCTGGAATGTCGCAATCGCAATCGCAAGTATCCTTCATCGGATTTCCATTTTTTCATTCGCAATCGCAATATCAATCGGAAACATCCTTCATCAAATCCATTTGAGTGGAAGGGCTTTCTCACAAAGGCAAGTTTCCAGAATATGAGAGTTTTAAATCTTGATAATAGTAATCTTTTGGCACAAATACCTGATATATCTGGTCTCCCAAATTTAGAAGAATTTTCAGTTCAAAAATGTTGGGAACTAACTGCAATTGATAAATCAGTTGGTTTTTTGCGTAAACTTAAAATCTTGAGATTTATAGATTGCACCAAAATCCAGAGTGTTCCACCTCTCAGTTTGGCTTCACTAGAAGAACTAGATCTTTCACATTGTTATAGTCTAGAAAGTTTTCCTCTCCTGGTGAAGGGATTTTTTGGAGAACTTAAAATCTTAAGGACTATAAAATGCACCAAAATCAAAATTATTCCATCTCTCATTTTACCTTCTCTAGAAGAACTCGATCTTTCAGATTGTACTAATCTTGAGAATTTTTTACCTGTGGAAGATGGGTTTGGTGATAAGCTTAAAACCATGAGTGTTAGACGTTGCATCAAGCTAAGGAGTATTCCACCACTCAAGTTGGATTTGCTAGAAACACTTAACCTTTCATGTTGTTATAGTCTTGAAAGTTTTCCACTTGTGATGGACGGGTTTCTTGGAAAACTTAAAACTCTACTTGTTAATAGCTGCATCAAGCTAAGGAGTATTCCACCTCTCAAGTTGGATTCGCTAGAAAAACTTGACCTTTCATGTTGTGGTGCTCTTGAGTGTTTTCCACCTGTGGTAGACGGGTTTCTTGGAAAACTTAAAACCCTGCTTGTTAAAAGTTGTCACGACCTCAAGAGTATTCCACCTCTCAAGTTGGATGCACTAGAAACACTTGACCTTTCATGTTGTTATAGTCTTGAAAGTTTTCCACTTGTAGTAGACGGGTTTCTTGGAAAACTTAAAACCCTACTTATTAATAGTTGTAGCAATCTCAAAAGTATTCCACCTCTTAAGTTGGATTCGCTAGAAAAACTTGACCTTTCATATTGTGGTAGTCTTGAGAGTTTTCCACTTGTGGTGGATGGGTTTCTTGGAAAACTTGAAACGCTGCTTGTTGAAAATTGTCAGAATCTCAGGAGTATTCCACCTCTCAAGTTGGATTCACTAGAAACACTTGACCTTTCATGTTGTTATAGTCTCGAGAGTTTTCCACTTGTGGTGGATGGTTTTCTTGGAAAACTTAAAACCCTACTTGTTACAAGTTGTCACAATCTTAAGAGTATCCCACCTCTCAAGTTGGATTCTTTAGAAACACTTGATCTTTCATGTTGTTATTGGCTCGAAAGTTTTCCACTTGTGGTGGACGGGTTTCTTGGAAAACTTAAAACCCTGCTTGTTACAAGTTGTCACAATCTCAGGAGTATTCCACCTCTCAAGTTAGATTTGCTAGAAGAACTTGACCTTTCAAATTGTTATAGGCTCGAGAGTTTTCCACTTGTGGTTCACGGGTTTCTCGGCAAACTTAAAATCCTTCTTGTTACAAGTTGTCACAACCTCAGGAGTATTCCACCTCTCCAGTTGGATTCACTTGAAAAACTTGACCTTTCAAATTGTTATAGGCTCGAGAGTTTTCCACTTGTGGTGGATGGGTTTCTTGGAAAACTTAAAACCTTACTTCTTACAAGTTGTCACAATCTCAGGAGTATCCCACCTCTCAAGTTGGATTCTTTAGAAAAACTTGACCTTTCATGTTGTTGTAGTCTTGAGAGTTTTCCATTGGTGGTGGATGGGTGGTTGGATAAACTTAAATTCTTGAATATTGAATGTTGCATCATGCTTACAAATATCCCACGGCTCAGGTTGACTTCATTGGAACATTTCAATCTTTCGTGTTGTTATAGTCTTGAGAGTTTTCCAGAAATATTGGGAGAGATGAGAAATGTACCAGCACTCGTCTTGGATGGAACTCCCATAAAAGAATTGCCGTTTCCGTTTCAAAATCTTACACAACCTCAAACATTATGTAACTGTGGATATGTCCACTTACCAAATAGGATGTCAACACTGGCTGAATTCACTATCCAGAATGAAGAGAAAGTGAACGCAATGCAATCTTCACATGTAAAATATATTTGTGTCAGGAACTGCAAACTTTCAGATGAATATCTGTCAAAAAGTCTTATGTTGTTTGCTAATGTGAAAGAATTACACCTAACTAAAAATCAATTCACAGTTCTTCCTAAATCTATCGAAAAATGTCATCTTTTATGGAGGCTTGTCTTGGATGATTGTGAGGAACTTTTGGAAATTGAAGGGATTCCTCCATGCTTAAAATATTTATCTGCAATAAACTGCAAATCATTGACTTCGTCATGCAAAAGCAAATTACTAAATCAGGAATTACATGAGACTGGAAATACTTGGTTCCATTTGCCACAAGCGAAAATTCCAGAGTGGTTCAATCACCAATGTATGGCAGGATTGTCAATTTCTTTCTGGTTTCGTAACAAGTTTCCTGCCATTACTCTCTGTGTTGTTTCTCCAATGACATGGTATGGTTCTCAACACCGTGTTACAGCGATCATCAACGGAAATACATTTTTCTATACACATGGTTCGAAGATAGGGACGACATCACGGAAGGATATGTACCATTTGCATCTTTTTCATATGCAAATGGAGCATTTCAATGATAATGTGGACAAAGCACTTTTGGAAAATAAGTGGAATCATGCAGAGGTTGACTTTGGATTCCCATTCATGTATAGTGGAATCCATGTATTGGAAGAAAAAAGTAACATGAAAGATATTCGATTCAGTAACCCAGAGATTGATGCTAACATTGTGTTACACCCGAGATGTTAA 3657 0.3694 MASITDRFKYDVFISFRGEDTRYGFTGYLKKALDDKGVRTFMDDDELQKGEEITPSLLKAIEDSMMAIVVLSKNYASSSFCLQEFSKILDSMMKDKARSILPIFYKVDPSDVRKLKRTYGWKLTRVEEILHAHYGDIMNDHINVLVEKSLIKISDSGNVTLHDLVEDMGKEIVRQESPEDPGKRSRLWSSKDIIKVLQENTGTSKIEIIHFGCWIKVEWDGEAFLKMENLKTLIFSNDVSFSTNPKHLPNSLRVLECRNRNRKYPSSDFHFFIRNRNINRKHPSSNPFEWKGFLTKASFQNMRVLNLDNSNLLAQIPDISGLPNLEEFSVQKCWELTAIDKSVGFLRKLKILRFIDCTKIQSVPPLSLASLEELDLSHCYSLESFPLLVKGFFGELKILRTIKCTKIKIIPSLILPSLEELDLSDCTNLENFLPVEDGFGDKLKTMSVRRCIKLRSIPPLKLDLLETLNLSCCYSLESFPLVMDGFLGKLKTLLVNSCIKLRSIPPLKLDSLEKLDLSCCGALECFPPVVDGFLGKLKTLLVKSCHDLKSIPPLKLDALETLDLSCCYSLESFPLVVDGFLGKLKTLLINSCSNLKSIPPLKLDSLEKLDLSYCGSLESFPLVVDGFLGKLETLLVENCQNLRSIPPLKLDSLETLDLSCCYSLESFPLVVDGFLGKLKTLLVTSCHNLKSIPPLKLDSLETLDLSCCYWLESFPLVVDGFLGKLKTLLVTSCHNLRSIPPLKLDLLEELDLSNCYRLESFPLVVHGFLGKLKILLVTSCHNLRSIPPLQLDSLEKLDLSNCYRLESFPLVVDGFLGKLKTLLLTSCHNLRSIPPLKLDSLEKLDLSCCCSLESFPLVVDGWLDKLKFLNIECCIMLTNIPRLRLTSLEHFNLSCCYSLESFPEILGEMRNVPALVLDGTPIKELPFPFQNLTQPQTLCNCGYVHLPNRMSTLAEFTIQNEEKVNAMQSSHVKYICVRNCKLSDEYLSKSLMLFANVKELHLTKNQFTVLPKSIEKCHLLWRLVLDDCEELLEIEGIPPCLKYLSAINCKSLTSSCKSKLLNQELHETGNTWFHLPQAKIPEWFNHQCMAGLSISFWFRNKFPAITLCVVSPMTWYGSQHRVTAIINGNTFFYTHGSKIGTTSRKDMYHLHLFHMQMEHFNDNVDKALLENKWNHAEVDFGFPFMYSGIHVLEEKSNMKDIRFSNPEIDANIVLHPRC 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02398 1218 Gene3D - 4 177 IPR035897 -
Mepo5g02398 1218 Pfam TIR domain 9 130 IPR000157 GO:0007165
Mepo5g02398 1218 Gene3D Ribonuclease Inhibitor 182 395 IPR032675 -
Mepo5g02398 1218 SUPERFAMILY L domain-like 180 574 - -
Mepo5g02398 1218 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 816 1121 - -
Mepo5g02398 1218 SUPERFAMILY "Winged helix" DNA-binding domain 118 198 IPR036390 -
Mepo5g02398 1218 Gene3D Ribonuclease Inhibitor 484 557 IPR032675 -
Mepo5g02398 1218 Gene3D - 587 634 - -
Mepo5g02398 1218 Gene3D - 635 677 - -
Mepo5g02398 1218 Gene3D Ribonuclease Inhibitor 396 483 IPR032675 -
Mepo5g02398 1218 Gene3D Ribonuclease Inhibitor 678 814 IPR032675 -
Mepo5g02398 1218 Gene3D Ribonuclease Inhibitor 815 952 IPR032675 -
Mepo5g02398 1218 SUPERFAMILY L domain-like 489 809 - -
Mepo5g02398 1218 Pfam C-JID domain 1075 1187 IPR045344 -
Mepo5g02398 1218 SMART till_3 9 148 IPR000157 GO:0007165
Mepo5g02398 1218 Gene3D Ribonuclease Inhibitor 953 1061 IPR032675 -
Mepo5g02398 1218 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 126 IPR035897 -
Mepo5g02398 1218 ProSiteProfiles TIR domain profile. 8 137 IPR000157 GO:0007165
Mepo5g02398 1218 SUPERFAMILY L domain-like 770 1072 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02398 Mepo-Chr5 29075920 29082939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02398 769 933 WRKY Transcription Factor Family AT4G12020 34.043 1.07e-08 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02398 - - mtr:25488454 2025.37