Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02337 ATGGAAACCGCTACCACCCTCACCGGATTACTCCAATCCGTCGCTGAAAAATTCCCCTCCCGTCGTGCCATCTCCGTCGCCGGAAAATTCGACCTCACCCATTCCCACCTCCATGAATTAGTCGAATCTGCAGCTAATCATCTCATCTCCGCTGGAATCAAACCCAACGATGTCGTCGCTCTCACCTTCCCCAACACCATCGAGTATGTTATCATGTTCCTTGCCGTGATTCGAGTCCGAGCCACGGCAGCACCATTAAACGCAGCATACACATCAGAAGAGTTCGAGTTTTATCTCTCCGACTCAGAATCAAAGCTTCTCTTAACACCATTAGAAGGCAACAACCCTGCTCAAACCGCAGCTTCAAAGCTCAACATTCCACTCGCTACAGTTTCCTTCAATAAAACCGAAGAAGAAACAAAACTTTCAATCTCGCTGAACCAAACCGAGTCAGCAAACTCGGTTTCAGAACTCATCAACGAACCATCCGACGTGGCACTTTTTCTCCACACATCAGGAACCACGAGTCGGCCTAAGGGGGTCCCACTGAGTCAACACAATTTAGTTTCATCGGTTCGTAACATTGAATCGGTTTACCGGCTCAGTGAGTTGGATTCGACGGTGATTGTTCTTCCGCTTTTTCATGTTCATGGGTTGATTGCTGGGTTGCTGAGTTCACTAGGTGCCGGAGGTGCGGTGGCGTTGCCGGCGGCGGGGAGATTCTCTGCATCGACGTTTTGGAAGGATATGATTCATTATAATGCCACGTGGTACACAGCGGTTCCTACCATACACCAGATTATATTGGACCGCCATCAAAGTAACCCGGAACCGGTTTACCCGAAACTCCGGTTCATTCGTAGCTGTAGTGCTTCGTTGGCTCCGGTTATTCTAGGTCGTTTGGAGGAAGCATTTGGGGCACCCGTTTTGGAAGCTTATGCCATGACTGAGGCTACTCATTTGATGTGTTCAAATCCTTTGCCAGAACATGGGCCTCACAAAGCTGGATCGGTCGGAAAACCTGTGGGTCAAGAAATGGCTATTTTGGATGAATCGGGCCGGGTTTTGGAGGCCGATGTTAATGGTGAGGTTTGTATTAAGGGAGAAAATGTTACAAAAGGGTATAAGAACAATGAAGAAGCTAATAAATCAGCATTTTTGTTTGGTTGGTTTCATACTGGTGATATTGGTTACTTTGATTCTGATGGGTATTTGCATCTTGTGGGTCGGATTAAGGAGCTCATCAACAGAGGAGGAGAGAAAATATCACCAATTGAAGTGGATGCTGTCCTTCTGGCACATCCAGACGTAGCTCAGGCAGTTGCTTTCGGAGTGCCAGATCAGAAATACGGCGAAGAGATACATTGTGCAATCATTCCAAGAGAAGGATCAAACATTGATGCTGAAGAGGTGCTAAAATATTGCAAGAAGAATCTCACATCTTTTAAAGTTCCCAAAAAGGTTTTCATTACTGATTCTTTACCCAAGACAGCCACTGGCAAGATTTTACGTCGTCTTGTGGCAGAACACTTTGTCTCTCAAGCTTGA 1548 0.4651 METATTLTGLLQSVAEKFPSRRAISVAGKFDLTHSHLHELVESAANHLISAGIKPNDVVALTFPNTIEYVIMFLAVIRVRATAAPLNAAYTSEEFEFYLSDSESKLLLTPLEGNNPAQTAASKLNIPLATVSFNKTEEETKLSISLNQTESANSVSELINEPSDVALFLHTSGTTSRPKGVPLSQHNLVSSVRNIESVYRLSELDSTVIVLPLFHVHGLIAGLLSSLGAGGAVALPAAGRFSASTFWKDMIHYNATWYTAVPTIHQIILDRHQSNPEPVYPKLRFIRSCSASLAPVILGRLEEAFGAPVLEAYAMTEATHLMCSNPLPEHGPHKAGSVGKPVGQEMAILDESGRVLEADVNGEVCIKGENVTKGYKNNEEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLAHPDVAQAVAFGVPDQKYGEEIHCAIIPREGSNIDAEEVLKYCKKNLTSFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02337 515 FunFam 4-coumarate--CoA ligase 2 413 514 - -
Mepo5g02337 515 Pfam AMP-binding enzyme 12 417 IPR000873 -
Mepo5g02337 515 FunFam Peroxisomal-coenzyme A synthetase 6 410 - -
Mepo5g02337 515 CDD FACL_fum10p_like 19 509 IPR045310 GO:0016874
Mepo5g02337 515 Pfam AMP-binding enzyme C-terminal domain 426 501 IPR025110 -
Mepo5g02337 515 ProSitePatterns Putative AMP-binding domain signature. 168 179 IPR020845 -
Mepo5g02337 515 Gene3D - 411 513 IPR045851 -
Mepo5g02337 515 PANTHER ACYL-COA SYNTHETASE 4 512 - -
Mepo5g02337 515 Gene3D - 5 410 IPR042099 -
Mepo5g02337 515 SUPERFAMILY Acetyl-CoA synthetase-like 5 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02337 Mepo-Chr5 27992222 27999807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02337 5 514 Monolignol Biosynthesis Gene Families AT4G05160 29.333 4.00e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02337 K22133 - gmx:100779306 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02337 5 27992222 27999807 Mepo5g02337 5 27992222 27999807 ECH