Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02308 ATGGCTTTCACTACCTCATTCCTAGCTGAAAAGAAGAACAAGGTTATGTTCATATTGGGTGCAACAGGAACTGGGAAAACTAAACTTTCCATCAACTTGGGTACTCATTACCCTGCTGAAATCATCAATTCGGACAAAATTCAAGTCTATAAGGGTCTTGATATTGTCACAAATAAGGTGCCTGAATCTGAACGTTGTTCGATTCCGCATCACTTATTAGGCATCATCGATGATCCTGAATATGATTTTACAGTGAACGATTTTTGCAAGAACGTGCTTGAATCCATAGATCTCATAATTGGCAATGGACGCCTACCTATTATTGTAGGAGGGTCCAATTCTTATATAAAAAAATGGGTTGAAGACCCAACCACTGCTTTTCTTTCAAAATATGACTGCTTTTTCATTTGGATAGATGTGTCTTTGCCTACTCTATTTCAATATGTAGGCGAAAGAGTTGATGAAATGGTTGCGGCGGGGATGGTTGATGAGATTCGAGAATATTATGTACCTGGGGCAGACAACTCCAAGGGAATTAGAAGGGCTATTGGGGTTCCTGAGCTTGATTCTTTTTTTCAGATAGAAAAGAAAAATGACATTGATGATGCTCAAAAGGAAAAGGTATTGAACGAAGCTATCAGAAAAACCAAACAGAACACTTGCATATTAGTTCAAAATCAACTCTTGAAGATTGAGAATATGTCTCAAATGCTTGGGTCGATGGTGTACAAAATTGATTCTACGGAAGTCTTTGAGGCCCTTCTGAAGGGAGAAGATTATAAACATTTGCATCAAGATATTGTAATTAAGCCAAGCATAGAGATGGTGAAGAGATTCCTGGGGGAGACATCTGTTGGATTTGAATATGAATAA 873 0.3803 MAFTTSFLAEKKNKVMFILGATGTGKTKLSINLGTHYPAEIINSDKIQVYKGLDIVTNKVPESERCSIPHHLLGIIDDPEYDFTVNDFCKNVLESIDLIIGNGRLPIIVGGSNSYIKKWVEDPTTAFLSKYDCFFIWIDVSLPTLFQYVGERVDEMVAAGMVDEIREYYVPGADNSKGIRRAIGVPELDSFFQIEKKNDIDDAQKEKVLNEAIRKTKQNTCILVQNQLLKIENMSQMLGSMVYKIDSTEVFEALLKGEDYKHLHQDIVIKPSIEMVKRFLGETSVGFEYE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02308 290 Pfam IPP transferase 48 122 - -
Mepo5g02308 290 Pfam IPP transferase 129 228 - -
Mepo5g02308 290 Gene3D - 12 280 IPR027417 -
Mepo5g02308 290 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 12 280 IPR039657 -
Mepo5g02308 290 FunFam Adenylate isopentenyltransferase 5, chloroplastic 142 242 - -
Mepo5g02308 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 172 IPR027417 -
Mepo5g02308 290 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02308 Mepo-Chr5 27409441 27410313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02308 90 286 C2H2 Transcription Factor Family AT2G27760 31.250 9.87e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02308 K10760 - mtr:11405692 488.419