Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02303 ATGTTCATATTGGGCGCAACAGGAACTGGGAAAACTAAACATTCCATAAACTTGGGTACTCATTACCCTGCTGAAATCATCAACTCGGACAAAATTCAAGTCTATAAGGGTCTTGATATTGTCACAAATAAGGTGCCTGAATCTGAACGTTGTTTGATTCCGCATCACTTATTAGGCATCATTGATGATCCTGAATATGATTTTACTGTGAACGATTTTTGCAAGAACGTGCTTGAATCCATAGATCTCATAATTGGCAATGGACGCCTACCTATTATTGTAGGAGGCTACTGCGAAGGCTGCGAACTTGTAAATGGAGAACAAATTCAAGAAATGACTTTAAATCTTTGTGTACTGACCCCCAATCGAACTATTTGGGATTCAGAAGTGAAGGAAATTATTTTATCTACTAATAGTGGACAAATTGGGGTATTAAAAAATCATGCGCCTATTGCCACAACTTTAGATATAGGTATTTTCAGAATACGCCTTAACGACCGATGGTTAACGATGGCTCTGATGGGCGGTTTTGCTAGAATAGGCAATAATGAGATCACTATTTTAGTAAATGATGCGGAAAAGGCTAGTGACATTGATCCACAAGAAGCGCAACAAACTCTAAAAATAGCAGAAGCTAACTTGAATAAGGCTGAAGGGAAAAGACAAACAATTGAGGCAAATCTAGCTCTCCGACGAGCTAGGACACGAGTAGAGGCTATAGTAGAGGCTATCAATAGGATCTCGTAA 747 0.3896 MFILGATGTGKTKHSINLGTHYPAEIINSDKIQVYKGLDIVTNKVPESERCLIPHHLLGIIDDPEYDFTVNDFCKNVLESIDLIIGNGRLPIIVGGYCEGCELVNGEQIQEMTLNLCVLTPNRTIWDSEVKEIILSTNSGQIGVLKNHAPIATTLDIGIFRIRLNDRWLTMALMGGFARIGNNEITILVNDAEKASDIDPQEAQQTLKIAEANLNKAEGKRQTIEANLALRRARTRVEAIVEAINRIS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02303 248 Gene3D - 1 99 IPR027417 -
Mepo5g02303 248 Hamap ATP synthase epsilon chain [atpC]. 112 239 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mepo5g02303 248 FunFam ATP synthase epsilon chain, chloroplastic 112 198 - -
Mepo5g02303 248 Coils Coil 207 227 - -
Mepo5g02303 248 Gene3D - 112 198 IPR036771 -
Mepo5g02303 248 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 113 240 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mepo5g02303 248 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 112 193 IPR036771 -
Mepo5g02303 248 Gene3D - 200 248 - -
Mepo5g02303 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 99 IPR027417 -
Mepo5g02303 248 CDD F1-ATPase_delta 114 234 IPR001469 GO:0015986|GO:0045261|GO:0046933
Mepo5g02303 248 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 114 192 IPR020546 GO:0015986
Mepo5g02303 248 Pfam IPP transferase 33 96 - -
Mepo5g02303 248 Pfam ATP synthase, Delta/Epsilon chain, long alpha-helix domain 197 240 IPR020547 -
Mepo5g02303 248 NCBIfam ATP synthase F1 subunit epsilon 113 240 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02303 Mepo-Chr5 27372488 27373855 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02303 3 96 C2H2 Transcription Factor Family AT2G27760 43.617 3.33e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02303 K02114 - lbb:132639714 237.654