Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02296 ATGAACCGCGCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTCAATGAACAGGACGTCCTTCTATTTATCGACAATATCTTCCGTTTTGTCCAAGCCGGATCCGAAGTATCTGCCCTATTGGGCCGAATGCCTTCCGCTGTGGGTTATCAACCCACCCTGGGTACTGAAATGGGTACTTTACAAGAACGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCTGCAGACGATTTGACCGATCCTGCTCCTGCCACGACATTTGCACATTTGGATGCTACTACTGTACTATCGAGAGGGTTAGCTTCCAAAGGTATCTATCCAGCAGTCGATCCTTTAGATTCAACGTCAACCATGCTCCAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGGGTTAAACAAACGTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATTCTTGGGTTGGACGAATTATCCAAAGAGGATCGTTTAACCGTAGCAAGAGCACGAAAAATTGAACGTTTCTTATCCCAACCTTTTTTCGTAGCAGAAGTATTTACAGGTTCCCCAGGGAAATATGTTGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGATAGTCTTCCTGAACGAGCCTTTTATTTGGTGGGTAATATCGATGAAGTTACTGCGAAGGCTGCGAACTTGTAA 756 0.4286 MNRAGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSKEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPERAFYLVGNIDEVTAKAANL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02296 251 NCBIfam F0F1 ATP synthase subunit beta 4 251 IPR005722 GO:0015986|GO:0045261|GO:0046933
Mepo5g02296 251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 138 IPR027417 -
Mepo5g02296 251 CDD ATP-synt_F1_beta_C 140 247 - -
Mepo5g02296 251 Gene3D - 1 133 IPR027417 -
Mepo5g02296 251 Gene3D - 136 251 IPR024034 -
Mepo5g02296 251 PANTHER ATP SYNTHASE 1 251 - -
Mepo5g02296 251 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 136 249 - -
Mepo5g02296 251 ProSitePatterns ATP synthase alpha and beta subunits signature. 124 133 IPR020003 GO:0005524
Mepo5g02296 251 FunFam ATP synthase subunit beta 136 251 - -
Mepo5g02296 251 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 4 133 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02296 Mepo-Chr5 27352235 27352990 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02296 13 197 Primary Pumps ATPases(2) AT1G78900 29.353 1.43e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02296 K02112 - egr:120295292 466.077