LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g02290	ATGACTTTAAATCTTTGTGTACTGACCCCCAATCGAACTGTTTGGGATTCAGAAGTGAAGGAAATTATTTTATCTACTAATAGTGGACAAATTGGGGTATTAAAAAATCATGCGCCTATTGCCACAGCTTTAGATATAGGTATTTTGAGAATACGCCTTAACGACCGATGGTTAACGATGGCTCTGATGGGCGGTTTTGCTAGAATAGGCAATAATGAGATCACTATTTTAGTAAATGATGCGGAAAAGGCTAGTGACATTGATCCACAAGAAGCACAACAAACTCTAAAAATAGCAGAAGCTAACTTGAATAAGGCTGAAGGGAAAAGACAAACAATTGAGGCAAATCTAGCTCTCCGACGAGCTAGGACACGAGTAGAGGCTATAGTAGAGGCTATCAATAGGATCTCGTAA	414	0.3913	MTLNLCVLTPNRTVWDSEVKEIILSTNSGQIGVLKNHAPIATALDIGILRIRLNDRWLTMALMGGFARIGNNEITILVNDAEKASDIDPQEAQQTLKIAEANLNKAEGKRQTIEANLALRRARTRVEAIVEAINRIS	137

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g02290	137	Pfam	ATP synthase, Delta/Epsilon chain, beta-sandwich domain	3	81	IPR020546	GO:0015986
	Mepo5g02290	137	SUPERFAMILY	Epsilon subunit of F1F0-ATP synthase N-terminal domain	1	82	IPR036771	-
	Mepo5g02290	137	Gene3D	-	1	87	IPR036771	-
	Mepo5g02290	137	NCBIfam	ATP synthase F1 subunit epsilon	2	129	IPR001469	GO:0015986\|GO:0045261\|GO:0046933
	Mepo5g02290	137	Coils	Coil	96	116	-	-
	Mepo5g02290	137	CDD	F1-ATPase_delta	3	123	IPR001469	GO:0015986\|GO:0045261\|GO:0046933
	Mepo5g02290	137	FunFam	ATP synthase epsilon chain, chloroplastic	1	87	-	-
	Mepo5g02290	137	Hamap	ATP synthase epsilon chain [atpC].	1	128	IPR001469	GO:0015986\|GO:0045261\|GO:0046933
	Mepo5g02290	137	Pfam	ATP synthase, Delta/Epsilon chain, long alpha-helix domain	86	129	IPR020547	-
	Mepo5g02290	137	PANTHER	ATP SYNTHASE DELTA/EPSILON CHAIN	3	129	IPR001469	GO:0015986\|GO:0045261\|GO:0046933
	Mepo5g02290	137	Gene3D	-	89	137	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g02290	Mepo-Chr5	27333777	27334190	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g02290	1	109	Primary Pumps ATPases	AT5G47030	30.769	4.26e-08	48.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g02290	K02114		-	cpap:5878421	239.195