Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02269 ATGGCCGTCACACCCTGTGACGGGTTGACCGTCACCCTTCAACTCGACCCAGCCGTCACTCAGCAACCTGACCGTCAGCACCCCGTGACGAGCAGACCGTCACACCCTGAGATTGGACAGACATCAAGGGGAAGTAACAACATCCCAACTAGGAACAAAAGGGTGTGTGTGGATCTGTCTTGTTGGATGGTTCAGCTTCAGAATGTCAGTAAATCGCATGCTTGTTTGAAGGAGAAAGTTCATCTTAGGGGACTCTTTCATCGTCTTAGAGCTCTCATTGCCCTCAATTGTACTGTTGTTTTTGTTTCAGATGGGTCAATTCCTGCCATTAAATTATCAACTTATAGGCGTCGCTTAAACAATGGAAAAGAGGTAGCCCAAAAAGAAACTAACTTACAGAAAACAACATCACAGCGGAGAAACCTGGGGTCTGAATTTTCATGCATGATTACAGAGGCTAAAATTTTGGGGATGGCTCTTGGCGTCTCATGTTTAAACGGGATTGAAGAAGCAGAAGCTCAGTGTGCTTTGTTGAACTCTGAATCATTATGTGATGGATGTTTCAGTTCAGATTCAGATATATTTCTTTTTGGTGCAAGGACAGTGTATAGGGATATCTGCCTTGGAGACGGTGGATATGTTGTATGTTATGAGATGGCAGACATTGAAAGAAAACTTGGATTTGGACGGGAGTCATTGATTGCTCTCTCCTTGCTTCTCGGCAGTGACTATTATCCAGGAGTTCACGGTTTAGGTCGGGATTCAGCTTGTCAGATAGTCAAATCAATTGGGGACAAATTTGTTTTAAAAAAATTTGCTTCTGAAGGACTTAGATGGGTGAAAAAAAGAAAAGGATTCAACAGATCAAAATTAGTGTTTTGTGGGAGAATTAGGATTAAAAGGCCAGTGGTGTCTGTTTGGGTCTATTTGCAGTTTGACAGTGATTTACAGAAACCAAGTGCAAGGAGATGTCTGGGATTTGTATGGCTGAATGTTAAATTCTTGATTGCCATGGAAATTAAGAAAACTAAAGCAGAAAGTGGAGGTCAAAATAATATAGGAAGGGATGATACGATTTTACAAGTGATTGATGCTTATCTGAAGCCAAAATGCCACTCAGCAGATTCAGATTTTCTGCTCAAGGCTCTTGCACAGTATCCATTTCAACGTACTAAACTACATCATATATGTGCTGTATCCTTTGAATGGCCTTCTGAGAGAACAGATGGATATATCCTTCCCTGTATAGCAGAAAGAGATTTACGACGATTCGCCAATCTGCGATTAGCCTCGTCTGAACTTGGACTGAACCTTCCTTTACATGAGATACCTGTAAAGTGTCCCGTGTCAGAAATCATAAAGAGCCGAAAAGCTCAAGGGAGAGAGTGCTATGAGGTTTCTTGGAAAGACATGGATGGACTTGAAACTTCAATAGTACCTGCAGATCTTATAGAAAGTGCCTGTCCCGAGAAGATTTCAGAATTCGAGGAGAAAAAAGCTCTGCGAAAGAAACAAAACGTTCAGAAAAGAAGAACAAAGAAAAAAGAAACTACGTCTTCTCTGGCTGAGCTTGATCTAAAACTGCAGAATTTGTTGCTAGATAATAATTTGCAAGACCATACCAACTACAGTGCCTCTGATTCTTCAGGAAGGATGTTAGAAGAGACAACTTCTACGGCTGAAGATGATCTAAACACAGAAAACATGATGCTGTCACATGATGACATAGAATATAATGAATGGATTCAGAATATCAGCAACATATCAAGCAATGATGTTGTTTCTAGCAAAGATAAAAATGTGGTCATAGATCTTCTGAGCCCTTCTCCACTTAAGCCATCAAATTCTTCAAAATTTCATCCATCAAGTGACCAAAATATTGAAGTGATTAATTTGAGTGATTCAGAAAATGAGGTGTCACCAGAACACAAGCAGAAAGCTAAAGAGCTTAGAATGTTCTTAGCAAGTATTAGAAATGAAATCCATTGA 1989 0.4027 MAVTPCDGLTVTLQLDPAVTQQPDRQHPVTSRPSHPEIGQTSRGSNNIPTRNKRVCVDLSCWMVQLQNVSKSHACLKEKVHLRGLFHRLRALIALNCTVVFVSDGSIPAIKLSTYRRRLNNGKEVAQKETNLQKTTSQRRNLGSEFSCMITEAKILGMALGVSCLNGIEEAEAQCALLNSESLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMADIERKLGFGRESLIALSLLLGSDYYPGVHGLGRDSACQIVKSIGDKFVLKKFASEGLRWVKKRKGFNRSKLVFCGRIRIKRPVVSVWVYLQFDSDLQKPSARRCLGFVWLNVKFLIAMEIKKTKAESGGQNNIGRDDTILQVIDAYLKPKCHSADSDFLLKALAQYPFQRTKLHHICAVSFEWPSERTDGYILPCIAERDLRRFANLRLASSELGLNLPLHEIPVKCPVSEIIKSRKAQGRECYEVSWKDMDGLETSIVPADLIESACPEKISEFEEKKALRKKQNVQKRRTKKKETTSSLAELDLKLQNLLLDNNLQDHTNYSASDSSGRMLEETTSTAEDDLNTENMMLSHDDIEYNEWIQNISNISSNDVVSSKDKNVVIDLLSPSPLKPSNSSKFHPSSDQNIEVINLSDSENEVSPEHKQKAKELRMFLASIRNEIH 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02269 662 ProSiteProfiles Chromo and chromo shadow domain profile. 447 507 IPR000953 -
Mepo5g02269 662 FunFam Flap endonuclease GEN-like 1 228 285 - -
Mepo5g02269 662 Gene3D - 229 287 - -
Mepo5g02269 662 Gene3D - 37 227 - -
Mepo5g02269 662 SUPERFAMILY PIN domain-like 51 243 IPR029060 -
Mepo5g02269 662 MobiDBLite consensus disorder prediction 541 561 - -
Mepo5g02269 662 Pfam XPG I-region 161 243 IPR006086 GO:0004518
Mepo5g02269 662 CDD PIN_GEN1 51 226 - -
Mepo5g02269 662 Gene3D - 446 514 - -
Mepo5g02269 662 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 178 198 IPR006084 -
Mepo5g02269 662 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 52 66 IPR006084 -
Mepo5g02269 662 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 99 118 IPR006084 -
Mepo5g02269 662 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 233 248 IPR006084 -
Mepo5g02269 662 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 157 174 IPR006084 -
Mepo5g02269 662 Pfam XPG N-terminal domain 52 120 IPR006085 GO:0004518
Mepo5g02269 662 SMART chromo_7 446 500 IPR000953 -
Mepo5g02269 662 MobiDBLite consensus disorder prediction 17 49 - -
Mepo5g02269 662 CDD CD_CSD 449 497 - -
Mepo5g02269 662 SUPERFAMILY Chromo domain-like 448 503 IPR016197 -
Mepo5g02269 662 SMART xpgn3 35 125 IPR006085 GO:0004518
Mepo5g02269 662 SMART xpgineu 158 228 IPR006086 GO:0004518
Mepo5g02269 662 MobiDBLite consensus disorder prediction 541 555 - -
Mepo5g02269 662 CDD H3TH_XPG-like 231 274 - -
Mepo5g02269 662 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 228 427 IPR036279 -
Mepo5g02269 662 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 51 625 IPR006084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02269 Mepo-Chr5 26779223 26790836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02269 81 264 Core DNA Replication Machinery Family AT5G26680 27.041 1.01e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02269 K15338 - qsu:111998992 693.73