Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02262 ATGCTTAATTTTCACCTCAAAACCTCTTACTTTACTTCCCTCACAACTATAACTCCTTTCCTCTTTCTTCTATTCATAAACCATGTTGAATCACAAGCTTCCATGGAACCTGTTCCTACTGATATCTCTCATCATAGATGGAATCCTTCCTTTGCAATCACAGCTGGTGCTGTACTTTGTCTACTTTTTTTCTTAGGAATTGTATTTTTCTACATCCGAAACTGCGTTGAATCGCGCATTGTCGTCACAAGAACCAACCCAACGGATTGTCCATGTTCATGTTCACAAGGTATAAACAAAGAACTCCTAAACACTTTCCCTATCCTTTTTTACTCAACAATCAAAGAGGTTAAAACAGATAAAGGACCATTGGAATGTGCAGTTTGTTTAACAGATTTTAAAGAACAAGACACCTTAAGATTACTACCTAAATGCAACCATGTTTTTCATCCTCAATGCATTGATTCATGGTTAGCTTCTCATATCACTTGTCCCGTTTGTCGCGCAAATCTTAACCAAGATTCTTGTCAAGTTGCAATGACCATCCCAGCCAATTTCAACAACAATGACCAAACATGTGAAGAAAATTCCGAAACCGTGCCCGAAATCACTCTCAATAATACTTCCAATGACCAAAACCAAAACCCAAACCAAATCAACTCTGATGCGAACAAAGGCGAAAGTATCAATTATGATGATGGGCATCCATCAAAATTGAAACTTTTGAGATCAAATTCAACAGGTCATTCATTGGTTGAACAAGTGAAGTGTGTAGAGAGATACACACTGATGTTACCAGAGGATGTTAGAAGGTACATTTTGGTTAACCATAGAAAAAGTTTTCAGCTTTCTATGAGTAGTAACATGGTTAAAGGGTTATGTTGGAGTGATAATGAAGGAATCAATGGTGAAACAAAAGTAGAGAAATGGGTTTTGTGTGCTAAACATGGTTGA 954 0.3711 MLNFHLKTSYFTSLTTITPFLFLLFINHVESQASMEPVPTDISHHRWNPSFAITAGAVLCLLFFLGIVFFYIRNCVESRIVVTRTNPTDCPCSCSQGINKELLNTFPILFYSTIKEVKTDKGPLECAVCLTDFKEQDTLRLLPKCNHVFHPQCIDSWLASHITCPVCRANLNQDSCQVAMTIPANFNNNDQTCEENSETVPEITLNNTSNDQNQNPNQINSDANKGESINYDDGHPSKLKLLRSNSTGHSLVEQVKCVERYTLMLPEDVRRYILVNHRKSFQLSMSSNMVKGLCWSDNEGINGETKVEKWVLCAKHG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02262 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 36 245 - -
Mepo5g02262 317 Pfam Ring finger domain 125 168 IPR001841 -
Mepo5g02262 317 MobiDBLite consensus disorder prediction 193 227 - -
Mepo5g02262 317 SUPERFAMILY RING/U-box 118 174 - -
Mepo5g02262 317 CDD RING-H2_EL5-like 125 168 - -
Mepo5g02262 317 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
Mepo5g02262 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 178 IPR013083 -
Mepo5g02262 317 MobiDBLite consensus disorder prediction 193 228 - -
Mepo5g02262 317 SMART ring_2 126 167 IPR001841 -
Mepo5g02262 317 FunFam E3 ubiquitin-protein ligase ATL6 89 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02262 Mepo-Chr5 26578957 26580462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02262 6 274 Rapid Response to Elicitors AT3G05200 35.125 5.01e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02262 K10664 - gmx:100782532 297.745