Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02243 ATGAGTGACAAAGAAAAGTTTGAGGTGGATGGAAATGAGGAGGATCCAATGAGTTATTCTAGTGGTATGCCACCTGATTGGAGATTTGGTGCAAATTCATCTGTTGGGTTGGTTTCAATTGGGAATTCTATGAGTATGAATAGAGGGGATTTGATTGGTTCTTCATCATGTTCATCTGCCTCAATGGTGGACTCATTTAGTCCTAACTTTTGGGACCATTCCGCGAATTCGCAAAACTTGGGATTTTGTGACATTAATGGGAGTTCTTCAAATACAATTGGAATTAGGAAAGATGGGTTTGGTTTTGGAAGGGGTGGTCATGATCATGGAACACTTGAAATTGGTTGGAACCAGGCTAATAATATGATGAAAGGGGATGGTTTTTTACCGAATGGACAAGGTGTTTTTCCTCAGAGTTTATCTCAGTTTCCTACTGATTCTGGTTTCATTGAAAGGGCTGCGAGGTTCTCGTGTTTTGGTGGAGGGAATTTCAGTGATGTGGTGAATGCTTATGGGGTTCCTCAATCCATGGCGATGTATGCCGGTTCAATTCATGGAACTAGGGATGCTCTTGCAGGCGTTGGACTTCGAGTAGCAAATGGAGGACCATCACAAGAGAGTGATGATCCGAATGTGGTTGAAGCAGCTACAAAAGGTGTGTCACCATCTGTTGAGCAATTGGCTACTAGAGAAAGTCCTTTGAAGAATGATAAAAGCGAGGGTCGGGTCGGGTCTCAAGATGAAGGGAAGCAAGCTCTTGTTCAGAATGTTAATGATACCGACAGAGGTGAATCAGGTGACGATGATGGCGGACTAGATGGTTCCCCAATGTTGGAGGGTACTACTAGTGGAGAGCCTTCTATGAAAGGACTAAACTCGAAGAAAAGGAAAAGAAGTGGACAGGATGCTGATAATGATAAACCCAATGGAACTCAAGAACTACAAAGTGAAGGTGCAAAGGACAACCCTGAGAACCAACAGAAGGGTGACCAACAACCAACTTCGACAATGAAGGCTTCTGGGAAAAATGCCAAACAGGGCTCTCAAAATTCTGATCCACCTAAGGAGGAATACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAACAGCCATAGCCTTGCAGAGAGGGTGAGGAGGGAAAAAATAAGTGAGAGGATGAAGTTTCTTCAAGAACTTGTGCCTGGATGCAGCAAGGTCACTGGTAAGGCAGTGATGCTGGATGAAATCATCAACTATGTACAGTCACTTCAACGACAAGTTGAGTTTTTGTCCATGAAACTTGCAACAGTTAATCCACGGCTGGATTTCAATATTGAAAGCCTTCTTGCTAAAGATATTCTTCACCAACGGCCTGGTCCTTCATCCACACTAGGATTTCCTCTAGAGATGTCAATGAATTTTCCTCCATTACATCCATCTCAACCAGGGATGATTCAGTCAGTGATTCCAAACATGGCAAACCCGTCCGATATCCTTCGAAGAACTATTCATACACAGTTAACACCGTTGAGTGGAGGATTCAAGGAGCCAAATCAGATGCCTGATGTGTGGGCGGACGAGCTTCACAATGTTGTACAAATGAGCTTTGCAACAACTGCTCCCATGAGTAGCCAAGATGTGGATGGTACCACGGCAGCAAATCAGATGAAAGTTGAACTTTGA 1665 0.439 MSDKEKFEVDGNEEDPMSYSSGMPPDWRFGANSSVGLVSIGNSMSMNRGDLIGSSSCSSASMVDSFSPNFWDHSANSQNLGFCDINGSSSNTIGIRKDGFGFGRGGHDHGTLEIGWNQANNMMKGDGFLPNGQGVFPQSLSQFPTDSGFIERAARFSCFGGGNFSDVVNAYGVPQSMAMYAGSIHGTRDALAGVGLRVANGGPSQESDDPNVVEAATKGVSPSVEQLATRESPLKNDKSEGRVGSQDEGKQALVQNVNDTDRGESGDDDGGLDGSPMLEGTTSGEPSMKGLNSKKRKRSGQDADNDKPNGTQELQSEGAKDNPENQQKGDQQPTSTMKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIESLLAKDILHQRPGPSSTLGFPLEMSMNFPPLHPSQPGMIQSVIPNMANPSDILRRTIHTQLTPLSGGFKEPNQMPDVWADELHNVVQMSFATTAPMSSQDVDGTTAANQMKVEL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02243 554 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 367 417 IPR011598 GO:0046983
Mepo5g02243 554 MobiDBLite consensus disorder prediction 199 354 - -
Mepo5g02243 554 MobiDBLite consensus disorder prediction 290 304 - -
Mepo5g02243 554 FunFam Basic helix-loop-helix transcription factor 364 436 - -
Mepo5g02243 554 Pfam Helix-loop-helix DNA-binding domain 370 418 IPR011598 GO:0046983
Mepo5g02243 554 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 256 474 IPR024097 GO:0006355
Mepo5g02243 554 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 365 436 IPR036638 GO:0046983
Mepo5g02243 554 Gene3D - 364 438 IPR036638 GO:0046983
Mepo5g02243 554 CDD bHLH_AtBPE_like 357 442 - -
Mepo5g02243 554 MobiDBLite consensus disorder prediction 305 353 - -
Mepo5g02243 554 SMART finulus 373 423 IPR011598 GO:0046983
Mepo5g02243 554 MobiDBLite consensus disorder prediction 231 245 - -
Mepo5g02243 554 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02243 Mepo-Chr5 26053600 26057529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02243 1 530 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 42.857 1.39e-111 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo5g02243 HLH 6.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02243 - - tpra:123911592 902.894