Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02220 ATGGCATCAAAAACAAGAACCTATATTATTAATGTTGCTATCATAGTAGCATTATTCATGGTCAATGTTGCATTATCAGATGACACAATTCCAATTCCTGCTAACAGAGCCCAAGTAGATTCATGGTTTAATACGAATGTGGGTCCATTAGAACAAAGAAAAAGTACCCTTGATCCTGCATTGGTGACTGCAGAGGCTGGTGCTAAAGTTATTAAAGTAATGCAAGATGGCAGTGGTGATTTCAAAACCATCAGCGATGCAATTAATAGCATACCTACTGGAAACACCGTACGTGTGATTGTGAACATTGGTGGTGGAAATTATAATGAGAAAATCAAAATTGAAAGGACAAAACCTTTCGTTACATTATATGGGACACCCGGAAATATGCCAAATTTAACGTATGGTGGAACTGCAAAACAATATGGCACAGTTGATAGTGCTACATTGATTGTTGAATCAGATTATTTTGTGGCTGCTAACATCCTCGTATCGAATTCTGCACCAAGACCAGATGGAAAGAGCGCGGGTGGTCAAGCGGTTGCATTGAGAATTTCTGGTGACAAAGCAGCATTCTATAATTGTAAGTTCTTCGGGTTCCAGGACACAATTTGTGATGACAGACATAATCATATTTTTAAAGATTGCGTAATTCAAGGCACTGTGGATTTCATTTTTGGAAGTGGGACGTCTCTATATTTGAAAAGTGAATTAAGAGCGCTTGGTGACGCTGGGCCAACAGTGATAGTAGCACAAGCAAGAAAAAGTGCATCAGATGCTGATTTATACTCATTTGTGCATTGTGATATTACTGGAACTGGAAGTACTACTTTCTTAGCTAGGGCATGGATGACTTATCCCAAAATTATCTATGCTTACTCAACTATGACCAATGTTGTTGATCCCAAAGGGTGGGATAACGCCATGCACCCTGAATTTGACAAAACTTCATACTTTGGAGAATATCAGAACACAGGACCAAAGTCAGATCCTAAAGCGCGTGCAAGTGTTGCAAAGCAACTAAGTGAAGCAGAGGTTAAACCTTTCATTACGCTTGGAATGATTCAAGCATCTAAATGGCTCCTTCCTCCTCCAAAAGTCTAA 1104 0.3931 MASKTRTYIINVAIIVALFMVNVALSDDTIPIPANRAQVDSWFNTNVGPLEQRKSTLDPALVTAEAGAKVIKVMQDGSGDFKTISDAINSIPTGNTVRVIVNIGGGNYNEKIKIERTKPFVTLYGTPGNMPNLTYGGTAKQYGTVDSATLIVESDYFVAANILVSNSAPRPDGKSAGGQAVALRISGDKAAFYNCKFFGFQDTICDDRHNHIFKDCVIQGTVDFIFGSGTSLYLKSELRALGDAGPTVIVAQARKSASDADLYSFVHCDITGTGSTTFLARAWMTYPKIIYAYSTMTNVVDPKGWDNAMHPEFDKTSYFGEYQNTGPKSDPKARASVAKQLSEAEVKPFITLGMIQASKWLLPPPKV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02220 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 64 361 - -
Mepo5g02220 367 FunFam Pectinesterase 66 363 - -
Mepo5g02220 367 SUPERFAMILY Pectin lyase-like 67 361 IPR011050 -
Mepo5g02220 367 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Mepo5g02220 367 Gene3D - 66 363 IPR012334 -
Mepo5g02220 367 Pfam Pectinesterase 71 355 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02220 Mepo-Chr5 25549340 25551811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02220 11 367 Carbohydrate Esterase AT1G69940 56.111 1.82e-149 424