Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02202 ATGGAAATTGAACAGGAATGTTCTTCTTTTTTTGTTGCTGTTGCTGTAAATAAGAGTAAAGTGGTGGAAAAGGTTGTGAAGAAGAAAGAAAATCGAGGTAGGAAAAGGAAGACAACAATTTCTGATGAAAATAATGCTGCCAAAGAGAAGAAGAAGAAGAAGAAGAAGAAGGAAACTCGTGGTAGGAAGAGAAAGATAATATTTAGTTTTGAAGCTGTAAAAGAGGAGGAAAATGGTAGTTTTGTGAAGAAGGAGAAGGAGGAACCTAATGGGAAAAGAAAAATGCATGTATCTGATAATAATAAAGGAGGTTATGCTTTAAGAAGTGCTGAAAAAATGAAACTTGATTGCATGCATAAGGAGACTAAGAACAAGAAAGAGAGCAACAATGATCATGACATTGAAACCTCCAAGTATATGCTGGAATGTCTTCTTCCATATTTAAGACAATTAGATCTTGAACAAATGGCTGAGATGGAGATAGAAGCCAAAATACAAGGGCTATCATCACTCTCTGAGCTAAAGATAAAAGTAGCATATTGTTCTAAAAATGAGTGTGCTTACTGTGACAACTGCCAGACCTCGATATTTGACTACCACAGAAGTTGTGCGAAATGCTCTTTTGACCTTTGTCTTCGCTGTTGCTATGAGCTTCGTCGTGGGGAGCTTCTAGGTGGTACTGGTCCAATTGAGTTTGAGTTAATCAACCGAGGGCAAGATTATCTGCATGGTGAGATAATAATTGGAGAAAATGAATCTCATGCTGCCGCCCAGCCTGAGATTCAGGAACGGCCAAAATCTGGGTGGCATGTAGGCAGTGATGGTAGCATTCACTGTCCAAAAGCCAATAATGAAGGTGATCATGGTTTCCTTGAGCTGAGACGAATGTTTCCGCCAAATTGCATCTCTGAGTTGGTATGTAAAGCAAAACAACTTAAAGAAGCCGTTAATCTCGAAGATATTGAGGAGACTCTTGATAATGTTTGCTCTTGTTTGAAGCCTGTTAAGAAGGAAGATAATATACTGAATAACACAGGGAAGGCGGATTTTCGTGAAGATTCCAGTGAAAACTTTTTATACTGTTCTAAGGCTATTGATCTACATAATCACGAGAAGGATTTAAGACATTTTCAATGGCACTGGAGAAAAGGGGAGCCTGTAATTGTCAACAACGTTATTGAATCAAGTACGTCTGGTTTAAGCTGGGAACCGATTGTCATTTGGCGTGCATTTCATCAGATAAGTGATACCAATGACAATTCACTTTCGAATGTGAAGGCAATTGATTGCTTAAATTGGTGCCAGGGAGATATTAAAGTGCATGATTTCTTTACTGGGTACACAAATGGTCGCAAGGATAATCTTGATTGGCCTCAGCTATTGAAATTGAATGATCGGCCTCCTAATTTATTTGAGAAAAATTTGCCTCGCCATTGTACCGAGTTCATATCCTCCTTGCCATATAAAGAATATACAGATCCTTTCAAAGGTGATCTTAACCTTGCTGCGAAGCTGCCTGATATTGTTCATGTGGGACCGAAAACATATATTGCTTATGGATTTCATCGGGAGCTTGGGCGGGGTGATTCTGTGACGAAGCTCCATTGTGATATGTCCGATGTAGTAAATGTGTTGACTCATGTTGCTAAAGTGGAACTGGAAACTGTGGGCATTACTGCAATTAAGAAATTAACACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACAAGGTAATAATCAGGATGGAGAGACCAATGTTAACAGGATTGATAATTTGTCTTCTTCCGTAATTGCTTCAGATGAGCACAATAGTGTTCGAGTCATGGAAAATGAAAGTGGACGAGTCATGGAAAGTGAAAGTGGATTATGTGATGCGAAGGTGGTTGATTCAGTTCATCAAGAAAATAGTTTAGATGGTGCTCTCTGGGATGTTTTTCGGAGAGAGGATGTACCTAAATTGATGGAATATCTGAAGAAGCATTTTGGACAGTTCAGGCATATCTATTGTTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGATCAGACATTTTATCTTACCAACAATCATAAGAAGAGGCTTAAGGAGGAGTATGGAATTGAGCCGTGGAGTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCATCAAGTCAGAAATCTGAAGTCGTGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGGGAGTGCTTCCGTCTGACAGAGGAAATCCGTAAACTTCCAGTGAATCACTATTTCACAGAGAACAAATTGGAGGTGAAGAAAATGATTATACATGCTATGCTTGATGTGGTAGAAAAGTTGGAGAATTCAAGGTCTGAGAAAACCGATGTTCCTTTGTAA 2391 0.3944 MEIEQECSSFFVAVAVNKSKVVEKVVKKKENRGRKRKTTISDENNAAKEKKKKKKKKETRGRKRKIIFSFEAVKEEENGSFVKKEKEEPNGKRKMHVSDNNKGGYALRSAEKMKLDCMHKETKNKKESNNDHDIETSKYMLECLLPYLRQLDLEQMAEMEIEAKIQGLSSLSELKIKVAYCSKNECAYCDNCQTSIFDYHRSCAKCSFDLCLRCCYELRRGELLGGTGPIEFELINRGQDYLHGEIIIGENESHAAAQPEIQERPKSGWHVGSDGSIHCPKANNEGDHGFLELRRMFPPNCISELVCKAKQLKEAVNLEDIEETLDNVCSCLKPVKKEDNILNNTGKADFREDSSENFLYCSKAIDLHNHEKDLRHFQWHWRKGEPVIVNNVIESSTSGLSWEPIVIWRAFHQISDTNDNSLSNVKAIDCLNWCQGDIKVHDFFTGYTNGRKDNLDWPQLLKLNDRPPNLFEKNLPRHCTEFISSLPYKEYTDPFKGDLNLAAKLPDIVHVGPKTYIAYGFHRELGRGDSVTKLHCDMSDVVNVLTHVAKVELETVGITAIKKLTQKHLEQDKRELQGNNQDGETNVNRIDNLSSSVIASDEHNSVRVMENESGRVMESESGLCDAKVVDSVHQENSLDGALWDVFRREDVPKLMEYLKKHFGQFRHIYCSPLKQVIHPIHDQTFYLTNNHKKRLKEEYGIEPWSFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEIRKLPVNHYFTENKLEVKKMIIHAMLDVVEKLENSRSEKTDVPL 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02202 796 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 28 790 IPR045109 GO:0032454|GO:0033169
Mepo5g02202 796 SMART cupin_9 475 754 IPR003347 -
Mepo5g02202 796 SUPERFAMILY Clavaminate synthase-like 369 777 - -
Mepo5g02202 796 Gene3D Cupin 357 763 - -
Mepo5g02202 796 MobiDBLite consensus disorder prediction 27 62 - -
Mepo5g02202 796 Coils Coil 566 586 - -
Mepo5g02202 796 MobiDBLite consensus disorder prediction 79 99 - -
Mepo5g02202 796 MobiDBLite consensus disorder prediction 35 49 - -
Mepo5g02202 796 MobiDBLite consensus disorder prediction 79 103 - -
Mepo5g02202 796 ProSiteProfiles JmjC domain profile. 455 754 IPR003347 -
Mepo5g02202 796 Pfam JmjC domain, hydroxylase 628 737 IPR003347 -
Mepo5g02202 796 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02202 Mepo-Chr5 25103779 25110359 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo5g02202 JmjC 1e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02202 K15601 - gmx:100780803 842.032