Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02197 ATGGCTAGGGATGAGGATGAACAACAACGACTTATTAGAGAGGATAGGATGCGCAAAGATGATGAGGAGGTGCCCGAGGATGTTGTGGCAGATTATCTTGACGCAGATAATGTAGCTCCTAAGGGTGAGCCTGAGCCTCAGACTCGGCGACGACCTCGTCGTCGTGTTCCATTGATACCGCCATACCCTGCTGGAGGGCCTCCCTTTCCTGGAGGTCCTGAGACCACGACATTGTTGTCCGACTACGCGAGGCACGTGGCGAACGCTCTTTGGGTGAACCATCATAATTCAGTTTCTGCTATGTTTCTCAAGATTTCCTTTTCGAATAGAGATTTTGTAATAGACACGTTACTACTACATGACTCTATTCATAAACTGAAATCCATATTCGAGGATGTCAACATCTGTAAGGTGATACACGGAGGAGCCCATGACATCCATTGGCTCCAGAGAGATTACCAAATCAACATTACAAATGTCTTAGACACACACCTTGCATGCCTCACACTCAACAAAAAGGAATCCTCTTATAATTTTCTGCTTAAGGAGTACTGCAACGACTCAAACGACAAATCAATGCAGTTATATGATTGGTCTGAAAGACCACTAACAGATAAAATGGTCCTCTATGGTGCAAAGGATACGCACTATTCAACCTTCATAGCACACAAACTAGTTCAAGAAGCAAAAGAAGAGGGAGTCTTAGAAGAAATATGGGACAAGTCTGATGATCTTTGCAAAAGTCTGCATGATAGAAGGACTGCAGTGACTGAAGTCTACAAAACTCTAACGGAGCCTTCCCCTGTTCTTGAAAGCCACATTAGAAGTTTGGAACGATTCACTCAATTAAACTCGGAGTCAAAGAGTGGAATAATTGATTTGAGTATTCTTCATGACCTGGCTGATGAATTGAATGCTTGCCTTCGACAAAATTTCTGCAGACTTGATTATTTTAACTTAAGCATGGTGAAGGAAATGCAGAATAAGATGACCAAACTACAGGAAAATATCCAAAATAACTTTATCCTTGCAAAAACTAACTGGGAGCAAAAGGACTTGAAAAAGAAGAAGCCTAAGAAAACCTGGAATCAAGTCAACAACAACATGGGAGTCTGTAACATTTGCTCCAACAACCGCATTTTGGAAAAGTTTCTTACCATTCCAGAATACTACATCGAACACTTACCTTTAGCACGGAAACAATCTTATTTGGCAAAAGAGACTTTCCATCTGTGTTCCTATCTGTGTGCGACATGCTTTAAGACAGCAAGTAAAATGTCTCAAAAAATAGAACAAAAGATATCACAAGAGTTTGGAATACAAAAGAAGAACAGCACTAAGAACAATTCCAAGATTGTCACGGATTTCTGCGGGATAACAAGCTATATGGACTTAGCTGATGTTCACCGAGAAAGTCTAAAATTGGAAGGAGAAAGGCTAAAAGCGGAGATCAACTTAGATGACAAGGAACATGGTTTAGCCATAATTAGTGCTGTATTAAAAACAGAAGTTACTGACACTGTTGATCTGACAGAGTCTAAGCTGCAGCAAGGACAGGATATGCAAAAATTCAATGCAGCTGTCCGGTTTGTTTGCATGTGGAGGGACATGTACATGATGGAAGGCATCAATTTCAGCATGGGTGACAATTCAAAACCAAAGAAGAAAACCAAATATGGGAGTGTTGCAATCGCATCATCAATTTCAAAAGTAACTGCCTCCGTAATGACTTATCCACATGAGTTAATACGTTCCCGGCTGCAAGAGCAAGGCCAAGCGAAAAATAGTAGTGGAGTTCAATATGCCGGTGTTATTGACTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTAAGGGATTTTATCGTGGTTGTGCTACTAATCTATTAAGAACAACCCCTTCGGCTGTTATTACATTCACCAGTTATGAGATGATACACAGGTTTTTGATGCGAACTATACCTGAAAAACGAGCCTAA 1977 0.4082 MARDEDEQQRLIREDRMRKDDEEVPEDVVADYLDADNVAPKGEPEPQTRRRPRRRVPLIPPYPAGGPPFPGGPETTTLLSDYARHVANALWVNHHNSVSAMFLKISFSNRDFVIDTLLLHDSIHKLKSIFEDVNICKVIHGGAHDIHWLQRDYQINITNVLDTHLACLTLNKKESSYNFLLKEYCNDSNDKSMQLYDWSERPLTDKMVLYGAKDTHYSTFIAHKLVQEAKEEGVLEEIWDKSDDLCKSLHDRRTAVTEVYKTLTEPSPVLESHIRSLERFTQLNSESKSGIIDLSILHDLADELNACLRQNFCRLDYFNLSMVKEMQNKMTKLQENIQNNFILAKTNWEQKDLKKKKPKKTWNQVNNNMGVCNICSNNRILEKFLTIPEYYIEHLPLARKQSYLAKETFHLCSYLCATCFKTASKMSQKIEQKISQEFGIQKKNSTKNNSKIVTDFCGITSYMDLADVHRESLKLEGERLKAEINLDDKEHGLAIISAVLKTEVTDTVDLTESKLQQGQDMQKFNAAVRFVCMWRDMYMMEGINFSMGDNSKPKKKTKYGSVAIASSISKVTASVMTYPHELIRSRLQEQGQAKNSSGVQYAGVIDCTKKVFQKEGIKGFYRGCATNLLRTTPSAVITFTSYEMIHRFLMRTIPEKRA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02197 658 ProSiteProfiles Solute carrier (Solcar) repeat profile. 557 648 IPR018108 -
Mepo5g02197 658 Pfam Mitochondrial carrier protein 557 651 IPR018108 -
Mepo5g02197 658 Pfam 3'-5' exonuclease 103 228 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mepo5g02197 658 SMART 35exoneu6 69 230 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mepo5g02197 658 MobiDBLite consensus disorder prediction 1 71 - -
Mepo5g02197 658 SUPERFAMILY Ribonuclease H-like 103 248 IPR012337 -
Mepo5g02197 658 MobiDBLite consensus disorder prediction 1 25 - -
Mepo5g02197 658 SUPERFAMILY Mitochondrial carrier 553 644 IPR023395 -
Mepo5g02197 658 Gene3D Mitochondrial carrier domain 494 657 IPR023395 -
Mepo5g02197 658 Gene3D - 93 263 IPR036397 GO:0003676
Mepo5g02197 658 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 104 249 IPR045092 GO:0000175|GO:0000467
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02197 Mepo-Chr5 25045450 25050603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02197 560 654 Chloroplast and Mitochondria Gene Families AT1G25380 68.421 2.60e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02197 K15115 - gmx:100816376 172.17