Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02184 ATGAGTAATGCAGAGAAGAAGGAGGCTTTAAGGAGAATGTTAGAGAATGATGAAGAAACTGGTAAAGATCCTTCTTCTGCTGATCTGAGAAAGAAACGTGGCAGAAAGAAAAAAGTGAAGATGGAAGACCAAACTGTTAGGGAATGTTCTTCTTTTTTTGTTGCTGTTGCTGTAAATAAGAGTAAAGTGGTGGAAAAGGTTGTGAAGAAGAAAGAAAATCGAGGTAGGAAAAGGAAGACAACAATTTCTGATGAAAATAATGCTGCCAAAGAGAAGAAGAAGAAGAAGAAGAAGAAGGAAACTCGTGGTAGGAAGAGAAAGATAATATTTAGTTTTGAAGCTGTAAAAGAGGAGGAAAATGGTAGTTTTGTGAAGAAGGAGAAGGAGGAACCTAATGGGAAAAGAAAAATGCATGTATCTGATAATAATAAAGGAGGTTATGCTTTAAGAAGTGCTGAAAAAATGAAACTTGATTGCATGCATAAGGAGACTAAGAACAAGAAAGAGAGCAACAATGATCATGACATTGAAACCTCCAAGTATATGCTGGAATGTCTTCTTCCATATTTACGACAATTAGATCTTGAACAAATGGCTGAGATGGAGATAGAAGCCAAAATACAAGGGCTATCATCACTCTCTGAGCTAAAGATAAAAGTAGCATATTGTTCTAAAAATGAGTGTGCTTACTGTGACAACTGCCAGACCTCGATATTTGACTACCACAGAAGTTGTGCGAAATGCTCTTTTGACCTTTGTCTTCGCTGTTGCTATGAGCTTCGTCGTGGGGAGCTTCTAGGTGGTACTGGTCCAATTGAGTTTGAGTTAATCAACCGAGGGCAAGATTATCTGCATGGTGAGATAATAATTGGAGAAAATGAATCTCATGCTGCCGCCCAGCCTGAGATTCAGGAACGGCCAAAATCTGGGTGGCATGTAGGCAGTGATGGTAGCATTCACTGTCCAAAAGCCAATAATGAAGGTGATCATGGTTTCCTTGAGCTGAGACGAATGTTACCGCCAAATTGCATCTCTGAGTTGGTATGTAAAGCAAAACAACTTAAAGAAGCCGTTAATCTCGAAGATATCGAGGAGACTCTTGATAATGTTTGCTCTTGTTTGAAGCCTGTTAAGAAGGAAGATAATATACTGAATAACACAGGGAAGGCGGCTTTTTGTGAAGATTCCAGTGAAAACATTTTATACTGTCCTAAGGCTATTGATCTACATAATCACGAGAAGGATTTAAGACATTTTCAATGGCACTGGAGAAAAGGGGAGCCTGTAATTGTCAACAACGTTCTTGAATCAAGTACATCTGGTTTAAGCTGGGAACCAATTGTCATTTGGCGTGCATTTCATCAGATAAGTGATACCAATGACAATTCACTTTCGAATGTGAAGGCAATTGATTGCTTAAATTGGTGCCAGGGAGATATTAAAGTGCATGATTTCTTTACTGGGTACACAAATGGTCGCAAGGATAAGCTTGATTGGCCTCAGCTATTGAAATTGAATGATCGGCCTCCTAATTTATTTGAGAAAAATTTGCCTCGCCATTGTACAGAGTTCATATCCTGCTTGCCATATAAAGAATATACAGATCCTTTCAAAGGTGATCTTAACCTTGCTGCGAAGCTGCCTGATAATGTTCATGTGGGACCAAAAACATATATTGCTTATGGATTTCATCGGGAGCTTGGGAGGGGTGATTCTGTGACGAAGCTCCATTGTGATATGTCTGATGTAGTAAATGTGTTGACTCATGTTGCTAAAGTGGAACTGGAAACTGTGGGCATTACTGCAATTAAGAAACTAACACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACAAGTTCATCAAGAAAATAGTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCAAAATTGAAGGAATATCTGAAGAAGCATTTTGGACAGTTCAGGCATATCTATTGTTCTCCGTTAAAGCAGGTTATTCACCCCATCCATGATCAGACGTTTTATCTTACCAACAATCATAAGAAGAGGCTTAAGGAGGAGTATGGAATTGAGCCGTGGAGTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCATCAAGTCAGAAATCTGAAGTCGTGCACCAAGGTTGCACTTGATTTTGTTTCTCCTGAAAATGTTGGGGAGTGCTTCCGTTTGACAGAGGAAATCCGTAAACTTCCAGTGAATCACTATTTCACAGAGAACAAATTGGAGGTGAAGAAAATGATTATACATGCTATGCTTGATGTGGTAGAAATGTTGGAGAATGCAAGGCTCACGATTTTGCCGATTTTGCCTATCGTTCAATTTACAGGGATTGAGCCTTGGACTTTTGATCAGAAGGTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCATCAATTGGGAAAATGGATTCCTGTGAAGGTGGGTGTAGAATTTCGACTGAGCCTTACTCCAATACACAAAACTGGCTTATAA 2517 0.3973 MSNAEKKEALRRMLENDEETGKDPSSADLRKKRGRKKKVKMEDQTVRECSSFFVAVAVNKSKVVEKVVKKKENRGRKRKTTISDENNAAKEKKKKKKKKETRGRKRKIIFSFEAVKEEENGSFVKKEKEEPNGKRKMHVSDNNKGGYALRSAEKMKLDCMHKETKNKKESNNDHDIETSKYMLECLLPYLRQLDLEQMAEMEIEAKIQGLSSLSELKIKVAYCSKNECAYCDNCQTSIFDYHRSCAKCSFDLCLRCCYELRRGELLGGTGPIEFELINRGQDYLHGEIIIGENESHAAAQPEIQERPKSGWHVGSDGSIHCPKANNEGDHGFLELRRMLPPNCISELVCKAKQLKEAVNLEDIEETLDNVCSCLKPVKKEDNILNNTGKAAFCEDSSENILYCPKAIDLHNHEKDLRHFQWHWRKGEPVIVNNVLESSTSGLSWEPIVIWRAFHQISDTNDNSLSNVKAIDCLNWCQGDIKVHDFFTGYTNGRKDKLDWPQLLKLNDRPPNLFEKNLPRHCTEFISCLPYKEYTDPFKGDLNLAAKLPDNVHVGPKTYIAYGFHRELGRGDSVTKLHCDMSDVVNVLTHVAKVELETVGITAIKKLTQKHLEQDKRELQVHQENSLDGALWDIFRREDVPKLKEYLKKHFGQFRHIYCSPLKQVIHPIHDQTFYLTNNHKKRLKEEYGIEPWSFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEIRKLPVNHYFTENKLEVKKMIIHAMLDVVEMLENARLTILPILPIVQFTGIEPWTFDQKVGDAVFIPAGCPHQLGKWIPVKVGVEFRLSLTPIHKTGL 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02184 838 ProSiteProfiles JmjC domain profile. 497 742 IPR003347 -
Mepo5g02184 838 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 775 IPR045109 GO:0032454|GO:0033169
Mepo5g02184 838 MobiDBLite consensus disorder prediction 77 91 - -
Mepo5g02184 838 Pfam JmjC domain, hydroxylase 620 725 IPR003347 -
Mepo5g02184 838 MobiDBLite consensus disorder prediction 1 44 - -
Mepo5g02184 838 Gene3D Cupin 773 826 - -
Mepo5g02184 838 MobiDBLite consensus disorder prediction 121 145 - -
Mepo5g02184 838 Coils Coil 82 102 - -
Mepo5g02184 838 MobiDBLite consensus disorder prediction 121 141 - -
Mepo5g02184 838 SMART cupin_9 517 742 IPR003347 -
Mepo5g02184 838 FunFam lysine-specific demethylase JMJ25 isoform X1 398 751 - -
Mepo5g02184 838 SUPERFAMILY Clavaminate synthase-like 412 773 - -
Mepo5g02184 838 MobiDBLite consensus disorder prediction 1 30 - -
Mepo5g02184 838 MobiDBLite consensus disorder prediction 68 104 - -
Mepo5g02184 838 Gene3D Cupin 400 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02184 Mepo-Chr5 24859050 24866575 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo5g02184 JmjC 1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02184 K15601 - csav:115721711 665.225