Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02171 ATGAGAGCCATGAAACTGATTGATACTAGGAATGAGAGCCATGAAACTGATGCTTCAGTAGTTGCAGATTCTTTCATTTCCGAGTCTCCTATCTTGACAGAAACCATCGACGTATATTCGGCAAACGCACCTTATAAGAGGAAGGTAAGCCCTACAAATACTGAGGAATTCAACCATCCTAGCACCTCCAGGAAAAAGAAGAAAACAAGTACTGATGATGCCAATGGACCTAAGACGTGCAACTGTAAGAAGAGTAAATGTTTGAAACTTTACTGTGATTGTTTTGGTGTTGGAATCTTCTGTGGTGACGGTTGTGCTTGCGGAGGTTTTGGCAACAGAGTAGAATTTCAGGAGAAAGTTGTTGAAACAAAACAACAAATTGAATCCCCTAATCCACAAGCATTTGCTCCCAAGATTGTACCATGTGCAACTGATGTTCCACCGAATAATATGGGATCTTCATATATTACTGATGTTCAACCTGCTTGTCTGGTGGAGTTTTGTTGGCCTTCCATGTTTGACTGGAAGGCAGAGCTTGCTCCTGTCACTTTTGCAGCAATCGCGACAGCAAGCCATCTTCCTGTTGCAGCGATTGAATCAATCATGCCTCATGCTGCTGTCACGTTCTTGCCTCCTGTGCAGGCTGCCATTCCGAAACCTTCCTTCGCGCAAGCACTGCATGGTTCTCTGGTACAGTCCGAACCGCTTCCTATGCCTTCTATTCGTGCTACTGCTGCACCCACTCAACAAAAGGATACAAGTGATGAGATAGAATAG 777 0.4427 MRAMKLIDTRNESHETDASVVADSFISESPILTETIDVYSANAPYKRKVSPTNTEEFNHPSTSRKKKKTSTDDANGPKTCNCKKSKCLKLYCDCFGVGIFCGDGCACGGFGNRVEFQEKVVETKQQIESPNPQAFAPKIVPCATDVPPNNMGSSYITDVQPACLVEFCWPSMFDWKAELAPVTFAAIATASHLPVAAIESIMPHAAVTFLPPVQAAIPKPSFAQALHGSLVQSEPLPMPSIRATAAPTQQKDTSDEIE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02171 258 MobiDBLite consensus disorder prediction 59 73 - -
Mepo5g02171 258 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 78 109 IPR005172 -
Mepo5g02171 258 SMART CXC_2 75 116 IPR033467 -
Mepo5g02171 258 MobiDBLite consensus disorder prediction 237 258 - -
Mepo5g02171 258 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 27 147 IPR044522 GO:0003700
Mepo5g02171 258 MobiDBLite consensus disorder prediction 49 76 - -
Mepo5g02171 258 ProSiteProfiles CRC domain profile. 76 139 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02171 Mepo-Chr5 24688756 24691447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02171 55 140 CPP Transcription Factor Family AT4G14770 45.349 1.25e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mepo5g02171 TCR 7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02171 K21776 - vvi:100261127 124.02