Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02165 ATGGGATCTTCTTCTACACCCTTTCCTTTTTCAAAGAATCCTGCTGCTGTAAACTCAGAATCAGTATCTGCGTCACTTGTTGAAACTAAATCTACTTTGAAACATGTGGCACGTGAAACAGAATCATCTGATAAGGATAACTGTCTTATATGTTTTGAAGATTATACCGATGAAAATCCTAAGATTGCTACAAGGTGCTGTCACCATTATCACCTTAGCTGTATATACGAATGGATGAGTATGAGTAAAACTTGCCCAGTTTGTAGACAGAAGGGACATGGTTTGCTAGAAGGCTTAGAAAGGAACGATTTCCATGATCAGAATTTAACCATATCCACAAGAACCTCCGCACCGGTATCTCTCCAGGAGAAAAATTAG 378 0.3889 MGSSSTPFPFSKNPAAVNSESVSASLVETKSTLKHVARETESSDKDNCLICFEDYTDENPKIATRCCHHYHLSCIYEWMSMSKTCPVCRQKGHGLLEGLERNDFHDQNLTISTRTSAPVSLQEKN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02165 125 MobiDBLite consensus disorder prediction 1 21 - -
Mepo5g02165 125 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 93 IPR013083 -
Mepo5g02165 125 ProSiteProfiles Zinc finger RING-type profile. 48 89 IPR001841 -
Mepo5g02165 125 Pfam Ring finger domain 46 89 IPR001841 -
Mepo5g02165 125 SMART ring_2 48 88 IPR001841 -
Mepo5g02165 125 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 23 90 - -
Mepo5g02165 125 SUPERFAMILY RING/U-box 32 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02165 Mepo-Chr5 24581549 24583319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02165 23 90 C3H Transcription Factor Family AT5G38895 50.000 5.68e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02165 - - jre:108989369 85.8853