Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02163 ATGGGTAGGGGAAAGGTAGAGCTAAAGAGGATTGAGAACAAAATAAATCGTCAAGTTACATTTGCAAAGAGAAGAAATGGGTTGCTCAAGAAGGCTTATGAGCTCTCTATCCTTTGTGATGCTGAGGTTGCTCTCATTATTTTCTCTAGCCGTGGAAAGCTCTATGAATTCTGCAGTGGCACTAGCATTGCCAAGACAATTGAACGGTATCAAAGATGCAGTTATGGAGCATTGGAAATAAACCACCAACCTGAAATTGAGACACAGAAGCGCTATCAAGAGTATCTCAAGCTAAAATCAAAGGTTGAAGCACTACAGCAAACACAGAGGAACATTCTTGGAGAAGAATTGGAGCAGTTGGATATCAATGAGCTTGAGCATATAGAACGTCAGTTAGACTCTTCCTTAAAGACAATCAGGTCAAACAAGACACAACATATGCTTGATCAACTTAAGGATTTGCAAAGAAAGGAAGAGATGCTATTGGAAACTAATAATGTCCTGAGGAATAAGTTGGAGGAAATTAATGTGACCCTTCAACCAACATGGGAATCTAGGGAGCAAAATGCAACCTATAGTGGCCACCCTCACCAATCAGAGGGATACTATGAGAAAGCACGTTGCAATAGTACATTGCAAATTGGCTACAATTCTTCGGTGTTAAATGAATCAAATGGAGCTGCAGGAACCTCATCTCATAATGCCAATGACTTCATGCATGGATGGATGAACTGA 735 0.4041 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSSRGKLYEFCSGTSIAKTIERYQRCSYGALEINHQPEIETQKRYQEYLKLKSKVEALQQTQRNILGEELEQLDINELEHIERQLDSSLKTIRSNKTQHMLDQLKDLQRKEEMLLETNNVLRNKLEEINVTLQPTWESREQNATYSGHPHQSEGYYEKARCNSTLQIGYNSSVLNESNGAAGTSSHNANDFMHGWMN 244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02163 244 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mepo5g02163 244 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mepo5g02163 244 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mepo5g02163 244 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mepo5g02163 244 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Mepo5g02163 244 MobiDBLite consensus disorder prediction 225 244 - -
Mepo5g02163 244 FunFam MADS-box transcription factor 1 13 97 - -
Mepo5g02163 244 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mepo5g02163 244 SUPERFAMILY SRF-like 2 83 IPR036879 GO:0003677|GO:0046983
Mepo5g02163 244 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Mepo5g02163 244 Pfam K-box region 87 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mepo5g02163 244 Gene3D - 13 111 IPR036879 GO:0003677|GO:0046983
Mepo5g02163 244 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mepo5g02163 244 Coils Coil 151 174 - -
Mepo5g02163 244 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 185 - -
Mepo5g02163 244 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo5g02163 Mepo-Chr5 24505920 24523404 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02163 1 243 MADS-box Gene Family AT5G15800 56.322 8.16e-95 277
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mepo5g02163 K-box 2.2e-24 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02163 K09264 - gmx:100811049 417.542