Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02149 ATGGAACAGAAACATGTTTTTTTGTCAGCATTGAGTGTTGGTGTTGGATTAGGTGTTGGACTTGGATTGAGTTCTGGACAAGCTGTCCAGAAATGGGTTGGAGGGAATCGCGATATCGACGAGGTTTCTGGTGAGCAGATTGTTGAAGAACTCAAGAGACTCGTTGTTGATGGAAAAGATAGCAAAGTTACATTTGATGAGTTTCCTTATTACCTAAGCGAAAAAACTCGAGTTTTGCTGACAAGTGCGGCATATGTTCATTTAAAACATCTTAACTTTTCCAAGCACACAAGAAACCTCTCACCAGCAAGCAGAGCTATTTTACTTTCTGGTCCTGCAGAACTTTATCAGCAAATGCTTGCCAAAGCTTTAGCACATTACTTCGAATCAAAGTTACTATTATTAGATGTTACTGATTTCTCTGTGAAGTTGCAAAGCAGATTTGGAATTCCAAGAAAAGAACCATGTTTCAGAAGGTCAATATCCGAGATGACTTTGGAACGAATGTCTGGTTTGTTTGGTTCGTTTTCAATGATGCCTTCAACCGGTGAAACTAGAGGAACTCTACGTCAACAAAACATTGAAAGTTCGAGTAATCCTCCAAGGCTTCGGAGGAATGCCTCTGCTGCGTCTGATCTAAGTAGCAGTTCTTCCCAAAGTGGTTCAACAAATCCAGCTTCTTTAAGACGCACGAGTAGCTTGTGTTTTGATGAGAAGCTCTTTGTACAGTCACTTTACAAGGTTTTGGTTTCTATCTCAGGAACTGATTCCATCATTTTATACATAAGGGATGTTGAGAAGCTTGTTCTAAAATCACCAAGGTTATTTAATTTACTACAAAGAATGATAAATAAATTATCAGGTTCGGTGTTGATACTCGGTTCTCAGATATCGGATTTAGAATATGATTGCAAAGAATTGGATGAAAGGGTTGCTAGGTTATTCCCTTATAACATCGAGATCAAAGATCCCGAAGATGAAACTCATCTCGGTAGCTGGAAAGGCCAACTCGAAGAAGACATGAAAATCATTCAGTTTCAAGATACTCGAAACCACATTGCTGAAGTACTCGCGGAAAATGACATTGATTGCGACGATTTGAATTCAATATGTCATGCAGACACAATGATACTTAGTAATTATATTGAAGAAATTGTGGTATCCGCGATTTCTTACCATTTGATGATTACTAAGGAACCAGAATACCGAAACGGAAAGCTAATTATCTCATCCAATAGTTTGTCGCAGGGATTGAGTCTGTTCCAGGAAGGCAAGAGTAGTGGAAATCTGAAGACTAATGATTCTAACAAGGAAAATGTTGACGATATTGCCATCACAAAGAATGATGTGAGGAATGAACACCAAGCACCAGAAAACAAAAGTGAGGCAGAAAAATCTATCCCTGTAACAAAAAAAGAAGGCGAAAATTCAGCGCCTGTAAAAGCAGAAGTTCCCGACAACGAGTTCGAGAAGCGAATTAGACCAGAAGTTATCCCTGCAAATGAGATAGGTGTTACATTCGCAGACATCGGTGCATTAGATGAGATAAAAGAATCACTTCAAGAGCTAGTAATGCTTCCCCTTAGAAGACCAGACCTCTTCAAAGGTGGACTTCTAAAGCCATGTAGAGGTATATTACTTTTCGGTCCACCTGGTACCGGAAAAACAATGCTAGCAAAGGCGATTGCGAATGAAGCAGGAGCCAGTTTCATTAACGTCTCAATGTCCACGATCACTTCAAAATGGTTCGGAGAAGACGAGAAGAATGTTCGAGCTTTGTTCACGCTAGCAGCTAAGGTTGCTCCGACTATTATATTCGTCGATGAAGTTGACAGCATGCTCGGTCAGCGTACTAGAGTCGGAGAACATGAGGCCATGAGGAAGATTAAAAATGAATTCATGACACATTGGGATGGACTATTATCAGGACCTAATGAACAAATTCTTGTTCTTGCTGCTACCAACAGACCGTTTGATCTTGATGAAGCAATTATACGACGGTTCGAGCGCAGGATCATGGTTGGTCTTCCAAGTGCTGAGAATAGGGAAATGATCCTTAAAACTCTAATGTCAAAGGAGAAACACGAAAACTTGGACTTCAAGGAACTAGCAACCATGACAGAAGGATTCAGTGGAAGTGATCTAAAGAATTTGTGCATAACTGCGGCTTATCGACCTGTTAGGGAGTTAATACAGCAGGAGAGAAAGAAGGAAATGGAAAAGAAGAAAAAAGAGGCAGAAAGTGTAAATTCCGAAGATGCTTCAAATAATAACGATAACGATGAACCAGAAATTATCTTGAGGCCTTTAAGCATGGAAGACATGAAACAAGCTAAGAATCAGGTGGCTGCAAGTTTTGCATCAGAAGGTTCAGTAATGGCTGAGCTAAAGCAATGGAATGAATTGTATGGAGAAGGTGGTTCAAGGAAGAAACAACAGCTTACATACTTCCTTTAA 2457 0.3997 MEQKHVFLSALSVGVGLGVGLGLSSGQAVQKWVGGNRDIDEVSGEQIVEELKRLVVDGKDSKVTFDEFPYYLSEKTRVLLTSAAYVHLKHLNFSKHTRNLSPASRAILLSGPAELYQQMLAKALAHYFESKLLLLDVTDFSVKLQSRFGIPRKEPCFRRSISEMTLERMSGLFGSFSMMPSTGETRGTLRQQNIESSSNPPRLRRNASAASDLSSSSSQSGSTNPASLRRTSSLCFDEKLFVQSLYKVLVSISGTDSIILYIRDVEKLVLKSPRLFNLLQRMINKLSGSVLILGSQISDLEYDCKELDERVARLFPYNIEIKDPEDETHLGSWKGQLEEDMKIIQFQDTRNHIAEVLAENDIDCDDLNSICHADTMILSNYIEEIVVSAISYHLMITKEPEYRNGKLIISSNSLSQGLSLFQEGKSSGNLKTNDSNKENVDDIAITKNDVRNEHQAPENKSEAEKSIPVTKKEGENSAPVKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLSGPNEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLMSKEKHENLDFKELATMTEGFSGSDLKNLCITAAYRPVRELIQQERKKEMEKKKKEAESVNSEDASNNNDNDEPEIILRPLSMEDMKQAKNQVAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 818
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02149 818 ProSitePatterns AAA-protein family signature. 648 667 IPR003960 GO:0005524|GO:0016887
Mepo5g02149 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 733 IPR027417 -
Mepo5g02149 818 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 504 679 - -
Mepo5g02149 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 372 IPR027417 -
Mepo5g02149 818 MobiDBLite consensus disorder prediction 435 486 - -
Mepo5g02149 818 MobiDBLite consensus disorder prediction 735 750 - -
Mepo5g02149 818 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 817 - -
Mepo5g02149 818 MobiDBLite consensus disorder prediction 425 486 - -
Mepo5g02149 818 SMART AAA_5 541 678 IPR003593 GO:0016887
Mepo5g02149 818 Gene3D - 504 676 IPR027417 -
Mepo5g02149 818 Coils Coil 727 752 - -
Mepo5g02149 818 MobiDBLite consensus disorder prediction 183 228 - -
Mepo5g02149 818 MobiDBLite consensus disorder prediction 735 763 - -
Mepo5g02149 818 Pfam AAA+ lid domain 697 740 IPR041569 -
Mepo5g02149 818 Pfam ATPase family associated with various cellular activities (AAA) 545 675 IPR003959 GO:0005524|GO:0016887
Mepo5g02149 818 Gene3D - 677 756 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo5g02149 Mepo-Chr5 24258146 24264248 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02149 471 734 Calmodulin-binding Proteins AT3G56690 36.630 7.05e-42 163