Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02134 ATGGAATCTTGGAGTTATATCCCTGAAGAGAGAAGCTATTTGTTTTCTGATGAAATGGACTTTTCACTTGATGCTTTTATGAGAAGTAGAAAACCATTGGTTGAATGGGAAAACAAATCTTCAAGTAACTTTGAGAGAGATGGATTTAATTCAGATAGAGAGTTAGTTAAAAGTATGGAATTTGTGGACTTGGGATTTCCTATGGAATCTTCTAGGACTGTTCGTGGTTCGGTTCAGACATCTAGCTGTGAGTTGGATAGTAATAATTCTAGTAAAAGAGAGAATTCCTCTATCCATGTTATTGCTTTTGATTCATCTTTTGCGGAAGACGATTCTGAGTCAAAGTATTTAAGTTCTCTAGTTGAATCGAAAAATCATGATTCTTCATTGATTGATTTGAAGCTAGGGAGATTAGTAGATTGTCAAGGTGTGGGGAGTGACAGTGATGCAAAAACATTCACTTCTGAATCTATGCCGATACATCAAACCGTGTTAGCCAAGAGATCCCGCACTTCTAGCTTACCTGCTTTGGCTCCTGTATGCCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCGAAAGATTACCACAAAAGGCATAAAGTCTGTGATGTTCACTCCAAAACAGCTAAAGTTATCGTCAATGGTGTTGAACAAAGGTTTTGTCAGCAGTGCAGCAGGTTCCATCTGGTAGCTGAGTTCGATGATGGTAAGCGCAGTTGTCGCAGGCGTCTAGCTGGACACAATGAGCGCCGAAGGAAACCTCAGTTTGATTACATGACTAGTAAACAACACAAGATTCTTCAATCATATCAAGGTACTAAAAACTTTTGCTTTCAAGACATATTTCAAAGTGGAATCCTTTTCCCAGAAAAGCACAATCAAATCTCTCAAAATGGACATATCAAACTGGAAGAGGACCCAATTTGCAGCCCTCAACTAGAAGAGCCCGCTACACACGGACACAAGTTATCTAGCCATGCTCTCTCTCTTCTGTCAGCTCAGTCACAGAATCCGTCGCACCAAGCAGCAGGAAATCCATCAGCTACTTCCAGTACTTTCTTTCGGGACATCTGCACGCAAGATAGAGGTGACCAAGTTTCTGAAACACCTTTGATGACAAGCTCTGTGAATAAACATGAACGAAATGAGTCTTTTCCATGTGGGATAAACTCTAAGGAAATTATTAAATCTGAACATGGTGCAACTGTTGATCTGTTTCAATTGTCTTCTAACCTTCAAAGGGTGGAGAAGCAAAGAAATTCTGTTTTGGTAAAATGGGAAAATGAAGATTGTTGTTTCTCAAACGTGTAA 1314 0.3957 MESWSYIPEERSYLFSDEMDFSLDAFMRSRKPLVEWENKSSSNFERDGFNSDRELVKSMEFVDLGFPMESSRTVRGSVQTSSCELDSNNSSKRENSSIHVIAFDSSFAEDDSESKYLSSLVESKNHDSSLIDLKLGRLVDCQGVGSDSDAKTFTSESMPIHQTVLAKRSRTSSLPALAPVCQVYGCNMDLSSSKDYHKRHKVCDVHSKTAKVIVNGVEQRFCQQCSRFHLVAEFDDGKRSCRRRLAGHNERRRKPQFDYMTSKQHKILQSYQGTKNFCFQDIFQSGILFPEKHNQISQNGHIKLEEDPICSPQLEEPATHGHKLSSHALSLLSAQSQNPSHQAAGNPSATSSTFFRDICTQDRGDQVSETPLMTSSVNKHERNESFPCGINSKEIIKSEHGATVDLFQLSSNLQRVEKQRNSVLVKWENEDCCFSNV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02134 437 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 115 350 IPR044817 GO:0003677
Mepo5g02134 437 FunFam Squamosa promoter-binding-like protein 14 173 242 - -
Mepo5g02134 437 Gene3D - 175 242 IPR036893 GO:0003677|GO:0005634
Mepo5g02134 437 Pfam SBP domain 181 254 IPR004333 GO:0003677
Mepo5g02134 437 SUPERFAMILY SBT domain 179 260 IPR036893 GO:0003677|GO:0005634
Mepo5g02134 437 ProSiteProfiles Zinc finger SBP-type profile. 178 255 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02134 Mepo-Chr5 23818057 23823010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02134 131 421 SBP-box Gene Family AT1G69170 41.088 3.16e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mepo5g02134 SBP 2.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02134 - - psat:127119704 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02134 5 23818057 23823010 Mepo5g02134 5 23818057 23823010 ECH