Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02128 ATGAATCATGAAGAGAAAATTACCATGGACTTCGTTCCACCATCTGATCAACACCTTTGTTACGTTCGTTGCAACTTCTGTAACACTGTCCTAGCTGTTGGCATACCATGCAAGAGGCTGCTAGATACTGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCTTTTCTCACAACAAGACCACCAAGTTCCAAAAATCAAACTGTTGATCATACCCTCAGTCTCCAGGGTATTTACAGTAGCAAAAAGGGCCAACCATCATCTTCTTTTTCCCCAACTACATCAACTGAGTCACTGTCCCCTAGACCACCGCCATTTGTTGTCAAACCACCTGAGAAGAAGCACCGTCTCCCATCTGCATACAACCGTTTCATGAAAGAGGAGATACAGCGCATCAAAGTAGCAAACCCTCAGATCCCACATCGAGAAGCTTTCAGTGCTGCTGCCAAAAATTGGGCTAGGTACATACCAAATTCACCAACCAGTTCAATTTCTGCAACTAAAAGAAACATTGAATGA 519 0.4412 MNHEEKITMDFVPPSDQHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLTTRPPSSKNQTVDHTLSLQGIYSSKKGQPSSSFSPTTSTESLSPRPPPFVVKPPEKKHRLPSAYNRFMKEEIQRIKVANPQIPHREAFSAAAKNWARYIPNSPTSSISATKRNIE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02128 172 MobiDBLite consensus disorder prediction 77 114 - -
Mepo5g02128 172 Pfam YABBY protein 16 155 IPR006780 GO:0007275
Mepo5g02128 172 SUPERFAMILY HMG-box 98 153 IPR036910 -
Mepo5g02128 172 CDD HMG-box_SF 116 152 - -
Mepo5g02128 172 MobiDBLite consensus disorder prediction 77 101 - -
Mepo5g02128 172 PANTHER PROTEIN YABBY 6-RELATED 16 162 IPR006780 GO:0007275
Mepo5g02128 172 FunFam protein CRABS CLAW isoform X3 107 167 - -
Mepo5g02128 172 Gene3D High mobility group box domain 107 158 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02128 Mepo-Chr5 23726877 23728652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02128 1 171 C2C2-YABBY Transcription Factor Family AT1G69180 65.143 1.58e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mepo5g02128 YABBY 3.5e-51 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02128 K25796 - gmx:100819079 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02128 5 23726877 23728652 Mepo5g02128 5 23726877 23728652 ECH