Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02121 ATGGAGTATGAGAGTGGAGGAAGTGGTTCTTTTGATTCTCAAAGTAAGAATCGTCGTCCTCGAACTCCTAATGAGATTCAAAGAAATAAGAAGAAACGTTATCGCTGTCCTCACACTCCGAATCAGCTTGAAAGGCTTGAAGAGGTGTTTAAGGAGTGTCCAAAACCTAATGAAAAACAAAAGTTGCAATTAAGCAAAGAATTAGCTTTGAGTTATGGTCAGATCAAATTTTGGTTTCAGAACAAAAGGACTCAGACGAAGGCAAAACTTGAAAGAAATAATAACCGTTTACTAAGGGCAGAGAATGATAAGATAAGATGTGACAATATATCTATGAAGGAAGCCCTAGAAAATTTAATCTGCCCCTCTGGTGGTTGTCCTCCAATCAATGGTGATTGTTATTTTGATAGAAAAAGGTTGAGATTTGAAAATATTCTACTCAAAGAAGAGCTTTATAGAAAATCAAGCATTATATCTGAATACACTGGAAGTTCAGTTTTATGGTTTCCGCCAGTTCCACCAATTCACATATCATCTTTGGATTCAACAATGGGGAGTTTTATTGGACAAGAACTGGTTGGACATTCATTTGATATTGGTGAAAGTCATAACAATCATTCATCGTTGCTTTGCCCTAAAGGAAAAGGAAAACTCTTGAATCCATCAAGTTTACCAAGTAGTGGTCAATTGTTGATGAATGAACAATTACCTCAACAATCATGGACTCCAAGGTATCAAAATACGCAAGTTGATACCTTTGGCAACGCAATGTTGCATGCGCAATATTCTGGACAAGATTCGGCAATTGTGCCCCCAAATTTTGATTTAGATGTCCAAAATCCTATTCTCTCAGGTGTCAATATCGATTCATCTGATCTTCTACTCCCCAGCATCGATTCATCTGATCTTCTACTCCCCGGCATCGATTCATCTGATCTTCTACTCCCCAACATCGATTCATCTGATCTTCTACTCTCCACCACTGTCCCGGGTTACACCACTTCATTAGGTGAGACCGGTGCTTCGACAATGCAATTAGGGGAATTTGGATTCGAGGGGGTTTTGATGATCCGTGGGAGTAAGTACCAGTTTAAATTACATCAAGATTTTTGCTGA 1116 0.3871 MEYESGGSGSFDSQSKNRRPRTPNEIQRNKKKRYRCPHTPNQLERLEEVFKECPKPNEKQKLQLSKELALSYGQIKFWFQNKRTQTKAKLERNNNRLLRAENDKIRCDNISMKEALENLICPSGGCPPINGDCYFDRKRLRFENILLKEELYRKSSIISEYTGSSVLWFPPVPPIHISSLDSTMGSFIGQELVGHSFDIGESHNNHSSLLCPKGKGKLLNPSSLPSSGQLLMNEQLPQQSWTPRYQNTQVDTFGNAMLHAQYSGQDSAIVPPNFDLDVQNPILSGVNIDSSDLLLPSIDSSDLLLPGIDSSDLLLPNIDSSDLLLSTTVPGYTTSLGETGASTMQLGEFGFEGVLMIRGSKYQFKLHQDFC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02121 371 Coils Coil 83 103 - -
Mepo5g02121 371 SMART HOX_1 31 93 IPR001356 GO:0003677
Mepo5g02121 371 ProSitePatterns 'Homeobox' domain signature. 64 87 IPR017970 GO:0000981|GO:0006355
Mepo5g02121 371 Gene3D - 7 88 - -
Mepo5g02121 371 MobiDBLite consensus disorder prediction 1 38 - -
Mepo5g02121 371 ProSiteProfiles 'Homeobox' domain profile. 29 89 IPR001356 GO:0003677
Mepo5g02121 371 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 29 183 IPR042160 -
Mepo5g02121 371 CDD homeodomain 32 87 IPR001356 GO:0003677
Mepo5g02121 371 FunFam Homeobox-leucine zipper protein HDG1 16 105 - -
Mepo5g02121 371 Pfam Homeodomain 32 87 IPR001356 GO:0003677
Mepo5g02121 371 SUPERFAMILY Homeodomain-like 18 88 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02121 Mepo-Chr5 23591399 23593791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02121 25 195 Homeobox Transcription Factor Family AT1G73360 53.216 2.32e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mepo5g02121 Homeodomain 3.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02121 K09338 - rcu:8273513 210.305