Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02115 ATGTTTTCATTGTTTTCAATGCTTAACTCCTTCTCTTCTTCTTCTCCTTCTTCATTCTTTTCTATCATTATTCTCCTTCTTTTTGGTTTCTCTTTCTCTTCTTCTAACCATGAAGCCTCAACTCTCTTCACATGGCTTCATACTTCATCATCACAGCCACCTTCATCTTTCTCTAACTGGAACATCAATGATCCTAATCCATGCAACTGGACCTCCATAACATGCTCATCACTCTCCTTTGTAACTGAAATCAATATACAATCCATCACTCTTCAACTTCCTATACCTTCCAACCTCTCTTCATTTCCATTTCTTAACAAACTTGTCATTTCTGATTCCAACCTTACTGGAACCATTCCTTCTGACATTGGTGATTGTTCTTCACTCACTGTCATTGATCTTAGCTTCAACAATCTTGTTGGTTCTATTCCTTCAAGTATTGGAAAGTTAGAGAATCTTGTAAACTTGTCTTTGAATTCAAATCAACTCACTGGAAAAATTCCATTTGAGATAAGTGATTGCATTAGTCTCAAAAATCTTCACCTTTTTGATAATCAGTTAGGTGGAAGTATTCCGAATTCGATCGGAAAATTGTCGAAACTTGAAGTTCTTAGAGCAGGTGGAAACAAAGATATAGTTGGGAAGATTCCAGAAGAGATTGGTGAATGTAGTAATTTGACTGTTTTAGGGCTTGCTGATACAAGAATTTCAGGCTCTTTGCCTGTTTCTTTTGGTAGACTTAAAAAGCTTCAAACATTGTCAATTTATACAACTATGCTATCTGATGAAATTCCTAAAGAGTTAGGTAACTGTTCTGAACTTGTTGATTTGTTTCTGTATGAAAATAGCTTATCAGGCTCTATTCCTTCAGAGATTGGTAAGTTGAAGAAGCTTGAACAGTTGTTTTTGTGGCAGAATGGTCTTGTTGGTGCTATTCCAAATGAGATTGGTAATTGTTCAAGTTTGAGAAAGATTGATCTCTCTTTGAATTCATTATCTGGAACTATACCTTTGTCTTTAGGAAGTCTTTTAGAGCTTGAAGAGTTTATGATTAGTGATAATAATGTATCTGGTTCCATTCCTGCAACTCTTTCAAATGCTGAAAATCTTCAACAGTTGCAAGTTGATACAAATCAACTATCAGGTTTGATTCCACCAGAGATTGGAAAGTTGTCAAATCTTTTGGTGTTTTTCGCTTGGCAGAATCAGCTTGAAGGAAGCATTCCTTCAAGTTTAGGAAACTGTAGTAAACTTCAAGCACTTGATTTGTCTAGAAATTCACTCACTGGTAGCATTCCTTCCGGACTGTTTCAGCTTCAAAACCTCACAAAACTACTTTTGATTTCAAATGATATATCAGGTTCTATACCATTAGAAATAGGTAGCTGCAAATCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACTGGAAGCATTCCTAAGACAATAGGAAATCTCAGGAATTTGAACTTTTTAGATCTCTCTGGGAACCGTCTTTCAGGGCCGGTTCCCGATGAAATAAGAAGCTGCATACAACTTCAAATGATAGACTTCAGCTTTAACAACTTAGAAGGCTCACTTCCTAATTCCTTGTCATCATTATCTTCACTTCAGGTATTGGATGCATCTTTTAACAAGTTTTCAGGTCCGTTGCCGGCAAGTTTAGGTCGTCTTGTTTCATTAAGTAAGTTAATCTTTGGAAATAACTTGTTTTCTGGACCAATTCCTGCATCACTAAGCCTATGTTCAAATCTCCAACTTATTGATCTTAGTAGCAATCAGCTCACTGGAAGCATACCGGCCGAATTAGGCCAAATTGAAGCTCTAGAAATCGCTCTCAATCTTAGTTGCAATTTACTAAGTGGAACAATACCTCTGCAGATATCTTCTCTTAACAAGCTTTCCATACTAGACCTTTCACATAACCAGTTAGAAGGAGATTTGCAAACTCTTTCAGAGCTAGATAACCTTGTTTCGCTCAATGTTTCTTACAACAAATTTACCGGCTATCTTCCAGATAACAAGCTTTTCAGGCAGTTAACATCGAAAGACCTCACTGGAAATCAAGGACTTTGCACTTCAGGTCAGGATTCATGCTTTGTATTGGACTCAAGCAAAACCGATATGGCGCTGAATAAGAATGAGATAAGGAAGTCGCGAAGGATTAAGCTAACTGTTGGATTGCTGATTGCCTTAACAGTTGTAATGTTACTTATGGGGATAACTGCTGTGATCAAAGCAAGAAGAACCATTCGAGACGATGATTCAGAATTAGGAGACTCGTGGCCATGGCAATTCATACCATTCCAGAAGCTAAACTTTTCAGTGGAACAAATACTGAGATGTTTGATTGATAGGAATATAATCGGTAAGGGATGCTCCGGTGTTGTTTATCGAGGTGAAATGGATAATGGAGAAGTCATTGCAGTGAAGAAACTGTGGCCTATAACAACCGATGAAGGAGAAGCATTGAAGGATTATAAAAGTGGAGTTCGAGACTCGTTCTCAGCTGAGGTCAAAGCACTTGGATCGATCCGTCATAAGAACATTGTCAGGTTCTTAGGTTGTTGTTGGAACAAGAAAACAAGATTGCTTATTTTTGATTATATGCCAAATGGAAGTTTAAGCAGTGTACTTCATGAGAGGACTGGAAGCTCCCTTGATTGGGAACTTAGATTCCGAATTCTCTTAGGTTCTGCAGAAGGACTAGCATATCTACATCATGACTGTGTTCCTCCTATAGTCCACAGAGATATCAAAGCCAATAACATCTTGATTGGACTTGAATTTGAACCTTATATTGCTGATTTTGGCTTGGCTAAGCTTGTTGATGATGGTGATGTCGGTCGTTCTTCCAATACAGTTGCCGGTTCCTATGGTTATATTGCTCCAGAATATGGCTATATGATGAAGATCACAGAGAAGAGCGATGTTTATAGCTACGGTGTAGTTTTGTTAGAAGTCTTGACGGGTAAGCAACCAATTGATCCAACCATACCAGACGGTTTACACGTTGTTGATTGGGTGAGACAGAAAAGAGGTCTTGAAGTACTTGATCCAACCCTACTTTCAAGACCAGAATCAGAAATAGAAGAAATGATCCAAGCATTGGGAATAGCCTTATTGTGTGTAAATTCATCTCCTGATGAAAGACCAACAATGAGAGATATAGCAGCAATGCTCAAAGAAATAAAGAATGAAAGAGAAGAATATGCAAAATTTGATGTGCTTTTAAAAGGGTCTCCTGCAAATGAAGCAAAAGTTCTTGCAACCTCTTCATCAGCATCAGCCATGCAAAGTTGGGTACAATACATCAAATGGTGGGACCCTTTCCCGGATCCTACTTATGCGGGAGCTTCAGTGCACCAGGGGTCTAAAAGACATTGGGGGGGTCGAGAAAAGAAATGCTCTAAAAAAAGATGGTCCATCAAAGCACTGCCATTGTGGATCAGAATCACCAAATCGCGAACTCAGGTCGCCGGAAAACGCAGTGGTCGTCGTAGCAAGAAGGAAGCGCCGCCGATAAACATTAAGAAGATGCCTCTGGGGCTAATTTTAGGAATTGGGAGGGCGTATCGATTGAAGCGAGCATCAACACTTGATATTCTATCACCAAAACGTGCTCCTCGAGGTTTTTACAAGGGAAAGAACTGCAAGCCCACTGGTTTCTTCACTCGCAAAGGTGGGTATGTGGTGGTGAAGGAAAAGTTACCAAACTATGTAGTTCCTGATTTGACTGGTTTTAAGCTCAAACCATATGTATCCCAGTGCCCCATAGAAGCGAAGACCTCCGAGGCTTCTCAAACGGCTAAATAA 3819 0.3909 MFSLFSMLNSFSSSSPSSFFSIIILLLFGFSFSSSNHEASTLFTWLHTSSSQPPSSFSNWNINDPNPCNWTSITCSSLSFVTEINIQSITLQLPIPSNLSSFPFLNKLVISDSNLTGTIPSDIGDCSSLTVIDLSFNNLVGSIPSSIGKLENLVNLSLNSNQLTGKIPFEISDCISLKNLHLFDNQLGGSIPNSIGKLSKLEVLRAGGNKDIVGKIPEEIGECSNLTVLGLADTRISGSLPVSFGRLKKLQTLSIYTTMLSDEIPKELGNCSELVDLFLYENSLSGSIPSEIGKLKKLEQLFLWQNGLVGAIPNEIGNCSSLRKIDLSLNSLSGTIPLSLGSLLELEEFMISDNNVSGSIPATLSNAENLQQLQVDTNQLSGLIPPEIGKLSNLLVFFAWQNQLEGSIPSSLGNCSKLQALDLSRNSLTGSIPSGLFQLQNLTKLLLISNDISGSIPLEIGSCKSLIRLRLGNNRITGSIPKTIGNLRNLNFLDLSGNRLSGPVPDEIRSCIQLQMIDFSFNNLEGSLPNSLSSLSSLQVLDASFNKFSGPLPASLGRLVSLSKLIFGNNLFSGPIPASLSLCSNLQLIDLSSNQLTGSIPAELGQIEALEIALNLSCNLLSGTIPLQISSLNKLSILDLSHNQLEGDLQTLSELDNLVSLNVSYNKFTGYLPDNKLFRQLTSKDLTGNQGLCTSGQDSCFVLDSSKTDMALNKNEIRKSRRIKLTVGLLIALTVVMLLMGITAVIKARRTIRDDDSELGDSWPWQFIPFQKLNFSVEQILRCLIDRNIIGKGCSGVVYRGEMDNGEVIAVKKLWPITTDEGEALKDYKSGVRDSFSAEVKALGSIRHKNIVRFLGCCWNKKTRLLIFDYMPNGSLSSVLHERTGSSLDWELRFRILLGSAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDVGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGLEVLDPTLLSRPESEIEEMIQALGIALLCVNSSPDERPTMRDIAAMLKEIKNEREEYAKFDVLLKGSPANEAKVLATSSSASAMQSWVQYIKWWDPFPDPTYAGASVHQGSKRHWGGREKKCSKKRWSIKALPLWIRITKSRTQVAGKRSGRRSKKEAPPINIKKMPLGLILGIGRAYRLKRASTLDILSPKRAPRGFYKGKNCKPTGFFTRKGGYVVVKEKLPNYVVPDLTGFKLKPYVSQCPIEAKTSEASQTAK 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02115 1272 FunFam Nuclear pore complex protein NUP107 35 188 - -
Mepo5g02115 1272 Gene3D Ribonuclease Inhibitor 38 148 IPR032675 -
Mepo5g02115 1272 Pfam Protein tyrosine and serine/threonine kinase 788 1061 IPR001245 GO:0004672|GO:0006468
Mepo5g02115 1272 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 434 528 - -
Mepo5g02115 1272 ProSiteProfiles Leucine-rich repeat profile. 634 656 IPR001611 GO:0005515
Mepo5g02115 1272 Pfam Mitochondrial ribosomal protein L27 1204 1264 IPR019189 GO:0003735|GO:0005762
Mepo5g02115 1272 Gene3D Ribonuclease Inhibitor 335 431 IPR032675 -
Mepo5g02115 1272 Gene3D Ribonuclease Inhibitor 527 612 IPR032675 -
Mepo5g02115 1272 FunFam Putative LRR receptor-like serine/threonine-protein kinase 613 698 - -
Mepo5g02115 1272 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Mepo5g02115 1272 SMART serkin_6 784 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02115 1272 SUPERFAMILY Protein kinase-like (PK-like) 762 1062 IPR011009 -
Mepo5g02115 1272 Gene3D Ribonuclease Inhibitor 149 235 IPR032675 -
Mepo5g02115 1272 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 210 433 - -
Mepo5g02115 1272 Gene3D Ribonuclease Inhibitor 613 700 IPR032675 -
Mepo5g02115 1272 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 767 870 - -
Mepo5g02115 1272 Gene3D Ribonuclease Inhibitor 236 334 IPR032675 -
Mepo5g02115 1272 Gene3D Ribonuclease Inhibitor 432 526 IPR032675 -
Mepo5g02115 1272 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 871 1080 - -
Mepo5g02115 1272 PRINTS Leucine-rich repeat signature 418 431 - -
Mepo5g02115 1272 PRINTS Leucine-rich repeat signature 632 645 - -
Mepo5g02115 1272 SUPERFAMILY RNI-like 278 648 - -
Mepo5g02115 1272 Gene3D Phosphorylase Kinase; domain 1 770 870 - -
Mepo5g02115 1272 ProSiteProfiles Protein kinase domain profile. 784 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g02115 1272 SMART LRR_typ_2 583 607 IPR003591 -
Mepo5g02115 1272 SMART LRR_typ_2 487 511 IPR003591 -
Mepo5g02115 1272 SMART LRR_typ_2 632 655 IPR003591 -
Mepo5g02115 1272 SMART LRR_typ_2 150 174 IPR003591 -
Mepo5g02115 1272 SMART LRR_typ_2 295 319 IPR003591 -
Mepo5g02115 1272 SMART LRR_typ_2 415 439 IPR003591 -
Mepo5g02115 1272 SMART LRR_typ_2 535 559 IPR003591 -
Mepo5g02115 1272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Mepo5g02115 1272 SUPERFAMILY L domain-like 47 401 - -
Mepo5g02115 1272 ProSitePatterns Protein kinases ATP-binding region signature. 790 813 IPR017441 GO:0005524
Mepo5g02115 1272 FunFam LRR receptor-like serine/threonine-protein kinase 533 608 - -
Mepo5g02115 1272 SUPERFAMILY L domain-like 614 719 - -
Mepo5g02115 1272 Gene3D Transferase(Phosphotransferase) domain 1 871 1080 - -
Mepo5g02115 1272 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 291 1064 - -
Mepo5g02115 1272 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02115 Mepo-Chr5 23531812 23541807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02115 56 1081 Receptor kinase-like Gene Family AT5G56040 49.376 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo5g02115 PK_Tyr_Ser-Thr 9.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02115 - - gmx:100818541 1744.55