Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02109 ATGGAAATTGTAGCTGCAATATGTTGGGGGCTAGGAAAAGCAGTGACAATTGAAGATATACAAGTAGATCCACCAAAGTCAAAAGAAGTTCGAGTTAAGATGCTTTGTGCTAGTCTCTGCCACACAGATATCTCAAGCACTCAAGGATTTCCACATAATAAATTCCCCCTAGCACTTGGGCATGAAGGAGTTGGTGTTATAGAGAGTGTTGGTGATGAAGTGACAAATATGAAAGAAGGGGATATTATAATTCCAACATATGTAGGGGAGTGTCAAGAATGTGTGAATTGTGTTTCAAGAAAAACCAATCTTTGTCTTACATACCCTGTAAGATTCACCGGTCTAATGCCCGATAACACTTCAAGATTGTCCATTCGAGGCCAAAGACTATATCATGTTTTGAGTTGTGCTACATGGTCAGAATATGTCGTTGTTGACGTCAACTACCTTCTCAAAGTTGATCCAACCATTAATCTAGCTTATGCAAGTTTCATCTCATGTGGGTTTTCAACTGGTTATGGAGCTGCTTGGAAGGAAGCCAAGGTTAAAAGTGGTTCAAGTGTTGCTGTGTTTGGTCTTGGAGCTGTTGGCTTAGGGGTCATAGGTGGAGCCAAAATGATGGGAGCAAGTAAAATAATTGGGGTTGATAAAAATGAGATGAAGAGAGAAAAAGGAGAAGCTTTTGGAATGACACACTTTATAAATCCAAGTGGTTCATATAAGTCTGCTTCTGATTTGGTTAAAGAACTAAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTCCTTCTTTACTTAATGTATCCGTTGAAGCCACGAAATTAGGAACAGGTAAAACAATAGCTATTGGTTCAGGAGTTGAAAATATTGTACCATTTGATCTTATTGCCATTCTATTTGGTAGAACATTGAAAGATTCTGTTTTCGGAGGACTGAAAACCACATCGGACCTTCCCATCATAGCTGACAAATGTCAGAATGAGGAATTCCCTCTTCAAGAACTGCTCACCCATGAGGTACCATTGGCAGATATAAACAAAGCATTTGAGCTAATGAAGCAACCCAATTGTGTGAAAGTTGTAATCAAGATGTGA 1104 0.394 MEIVAAICWGLGKAVTIEDIQVDPPKSKEVRVKMLCASLCHTDISSTQGFPHNKFPLALGHEGVGVIESVGDEVTNMKEGDIIIPTYVGECQECVNCVSRKTNLCLTYPVRFTGLMPDNTSRLSIRGQRLYHVLSCATWSEYVVVDVNYLLKVDPTINLAYASFISCGFSTGYGAAWKEAKVKSGSSVAVFGLGAVGLGVIGGAKMMGASKIIGVDKNEMKREKGEAFGMTHFINPSGSYKSASDLVKELSGGMGVDYSFECTGVPSLLNVSVEATKLGTGKTIAIGSGVENIVPFDLIAILFGRTLKDSVFGGLKTTSDLPIIADKCQNEEFPLQELLTHEVPLADINKAFELMKQPNCVKVVIKM 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02109 367 PANTHER ALCOHOL DEHYDROGENASE 4 359 - -
Mepo5g02109 367 Gene3D - 172 310 - -
Mepo5g02109 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 60 74 IPR002328 GO:0008270|GO:0016491
Mepo5g02109 367 FunFam S-(hydroxymethyl)glutathione dehydrogenase 172 310 - -
Mepo5g02109 367 SUPERFAMILY GroES-like 317 365 IPR011032 -
Mepo5g02109 367 CDD liver_alcohol_DH_like 5 366 - -
Mepo5g02109 367 Pfam Alcohol dehydrogenase GroES-like domain 28 153 IPR013154 -
Mepo5g02109 367 SUPERFAMILY GroES-like 1 183 IPR011032 -
Mepo5g02109 367 Gene3D - 6 362 - -
Mepo5g02109 367 Pfam Zinc-binding dehydrogenase 195 314 IPR013149 -
Mepo5g02109 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 329 IPR036291 -
Mepo5g02109 367 FunFam alcohol dehydrogenase 1-like isoform X1 11 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02109 Mepo-Chr5 23471683 23473784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02109 28 167 Monolignol Biosynthesis Gene Families AT4G37970 27.465 9.56e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02109 K00121 - gmx:100798341 581.637