Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02051 ATGTCTTCTCCGAGTATTGTTCATCAGTTCCATAAGTCGCAATGTTTTTTCAAAGTCATCGTCGAGAGAACCCTTAGAAAGAAAGAGATTATGCTTCCTAGGAGTTTTGTGAAGAAATATGGAAAAAAATTATCAAACCCAGTAACCCTAGTTCTACCAAATGGTGATAAATGGGAAGTAAATTGGATAAAACGTGACCATGACGTGTGGTTTCAAAAGGGTTGGGAAAATTTTGCACAACATTATTCAATGAGTTATGGGCATTTTTTAGTTTTTAGATTTGAAACAAGGTCTCAATTTCAAGTAATGATATTTGACAAAAGCGCTTTGGAATTGGATTATTGGAGTATACCAAGCCCTAGAGATGAAGTTGAAAGAAACATTCATCATCATGAAGATGCTGAAAAGAGTGGCGATAAAGACGATTATATTGAGATTTCAGATGAGAGTGAAATGCTAAGATCTTCGTCACCTCAACCTCAGAAAAGAAAGAAAACCAGTGATGGAGGTAATGGAGAAAATTTCTTCAAAGCAAAGAATGACTCATTAAATGAAGCTATGAATTGGAAAGAATCACTACAAAATACTAAAAGGAGAGCCATGAATTTTCATTCCGATAACCCCTTTTTCATTCGTCCGTTGCATCCATCCTACCTTGAACATATGTTTATACCATCATCTTTTTCCAAAGAATATTTGAATGGCAAGAATGGGATTGCAACCGTGGTGTTTGGTGATGAGGATAAGACTTGGCCCTTAAACTTCAAGTTCAATGCTACCACTAATCGAGCACTCATAACTTCTGGTTGGAGACAAATTGTTGAGGAATATAATTTCAAAGTTGGTGACACTTGTGTGTTTGAGATGACTGATAGTACAAATATCTTATTTAAAGGCTATATTGTTCGAGCCAATGATCAATCTAGCTCCGAACACTTTCAAGATTTTGGAAATCCTAAAATGAAGAGGAAATCAAATTCAAGACAAAACTGA 993 0.3545 MSSPSIVHQFHKSQCFFKVIVERTLRKKEIMLPRSFVKKYGKKLSNPVTLVLPNGDKWEVNWIKRDHDVWFQKGWENFAQHYSMSYGHFLVFRFETRSQFQVMIFDKSALELDYWSIPSPRDEVERNIHHHEDAEKSGDKDDYIEISDESEMLRSSSPQPQKRKKTSDGGNGENFFKAKNDSLNEAMNWKESLQNTKRRAMNFHSDNPFFIRPLHPSYLEHMFIPSSFSKEYLNGKNGIATVVFGDEDKTWPLNFKFNATTNRALITSGWRQIVEEYNFKVGDTCVFEMTDSTNILFKGYIVRANDQSSSEHFQDFGNPKMKRKSNSRQN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02051 330 MobiDBLite consensus disorder prediction 311 330 - -
Mepo5g02051 330 SMART B3_2 16 108 IPR003340 GO:0003677
Mepo5g02051 330 SMART B3_2 210 305 IPR003340 GO:0003677
Mepo5g02051 330 Gene3D - 8 109 IPR015300 -
Mepo5g02051 330 SUPERFAMILY DNA-binding pseudobarrel domain 204 304 IPR015300 -
Mepo5g02051 330 MobiDBLite consensus disorder prediction 150 177 - -
Mepo5g02051 330 Gene3D - 190 308 IPR015300 -
Mepo5g02051 330 ProSiteProfiles B3 DNA-binding domain profile. 15 108 IPR003340 GO:0003677
Mepo5g02051 330 ProSiteProfiles B3 DNA-binding domain profile. 207 305 IPR003340 GO:0003677
Mepo5g02051 330 Pfam B3 DNA binding domain 217 292 IPR003340 GO:0003677
Mepo5g02051 330 Pfam B3 DNA binding domain 16 107 IPR003340 GO:0003677
Mepo5g02051 330 MobiDBLite consensus disorder prediction 150 165 - -
Mepo5g02051 330 PANTHER B3 DOMAIN-CONTAINING 10 292 - -
Mepo5g02051 330 CDD B3_DNA 15 106 IPR003340 GO:0003677
Mepo5g02051 330 CDD B3_DNA 208 293 IPR003340 GO:0003677
Mepo5g02051 330 SUPERFAMILY DNA-binding pseudobarrel domain 13 108 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02051 Mepo-Chr5 22794441 22796074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02051 16 306 B3 DNA Binding Superfamily AT3G18990 30.029 9.12e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo5g02051 B3 4.9e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02051 - - tpra:123913572 400.593