Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02032 ATGGCGTCACAAATGTCGATTCTCTATCGAACGCGTTCTCTTCTCACAAAACCCAATTTCACAATCAAATCAATCTCAACATTCCCATATCTCAATCAAGAACCCGAACTTGTAGACCCCACACCACCACCACCAACAGAATCATCACTCCCACCAAACCCCGCTTCAGGATCCCCACTCTACAACGAAAATTGGCGCAACCCAGTTCCAAAAACATCATCTTTAACCCCATTTGGTCATTTCACACGCGCTTCAGTTTCTGAAACCTACGATTCCAACGCGCTTTTGAATGTTTTTGGTGATTGGGTAGCTTCACAACGTTGGGGTGATGTGAAGGAAATGTTTGAAGGATGGGTTAGGAGTTTGGATAAAAATGGGAAACCTAATAAACCTGATGTTAATTTGTTTAATCATTATATTAGGGCTAATCTTATGATTGGTGCTTCTGCTGCTGATTTGCTTGATTTGTTAGCTCAGATGGAACAATTTGATATATTGCCGAATACAGCGAGTTTTAATTTGGTTCTTAAGGCTATGCATCAGGCTGGAGAGACTCTTGCTGCTGAGAAGCTTCTTGAAAGGATGCTGCAATCTGGAAATGAAGCACTTCCTGATGATGAATCATTTGACTTGGTCATTGGAATGCTCTTTGCAACAGATCAGATTGATACTGCATTCAAATATATAGATTCAACTCTAAAACATGGTAACACGTTGTCAGTGAATTTATTTATGAAATGTGTGAGGAGTTGTGTCAAACAAGGAAGGCTTGATACATTGGTGGCAATAATTGAAAAGTGCAGGGCAACAGATCAAAACAAAGCCCTTTGCCCCTCCTGGAAATTGTGCATTTTCATAGCTGAAGTTGCAATTCGAGCGGATAATAGCAAGTTAGCCTATTATGGCCTGGAGTTTATGGCTCGATGGATTGTAAAGGGTGAACGTGCAAGACCTCCTGTGTTGCTTTCTGTAGATGAAGGCTTAGCCGTGTCAGCTCTGATGACTGCAGGTAGAACCTATAATTCTGAGCTGCTAGGAGCAGCATGGGCTGTTTTGGACCGTTCGTTGCGTAAAAAGAAGCTTCCAAATCCAGAATCTTATCTCTCAAAGATATATGCCCTTGCATCATTGGGCCATCTACAAAAGGCATTTGGCACTCTGCATGATTATGAGCGTGCTTATGGAAATTCTGATCAAGAAGCTGACGACTTATTCTGCCCATTTACTTCTTTACATCCATTGGCTGTTGCATGCTCAAAGAAGGGTTTTGAGACTTTGGATACTGTTTATTTTCAACTGGAGAATTTAATCCATGCTGAACGTCCATACAAGTCTCTTGCTGCGCTAAACTGTATCATTGTAGGATCTGCGAACATATGGGACCTTGATCGAGCTTACCAAACTTATGAATCAATTGTTTCTACTTTTGGGTTGACTCATAATATTCATTCGCACAATGGGCTGATGTATGCATTTGTGAAGGTCAATAAGACACATGATGTTTCAAAGGTGTTTGGGCACATAGTAAGTTCGGGTCTCAAGCCTAATGCAAAGTCGTATTGCCTGCTTATCGATGCCCACCTGATTAACCGGGATGTTAAATCTGCTATGGGAGTGCTTGATGATATGATAGCTGCTGGATTTGAACCGATGAAAGTGACACTAAAAAAGATCAGAAGGCGATGCATACGAGAGTTCGACACTGAAAGCGATGAACGACTGGAGTCACTCGCTCAATCTTACAATTACCGACTGGGTTCTGAAGCCCGACGAAACATGCTGTTTAATCTTAATTACAGTACTGAAATGGCTTGA 1815 0.416 MASQMSILYRTRSLLTKPNFTIKSISTFPYLNQEPELVDPTPPPPTESSLPPNPASGSPLYNENWRNPVPKTSSLTPFGHFTRASVSETYDSNALLNVFGDWVASQRWGDVKEMFEGWVRSLDKNGKPNKPDVNLFNHYIRANLMIGASAADLLDLLAQMEQFDILPNTASFNLVLKAMHQAGETLAAEKLLERMLQSGNEALPDDESFDLVIGMLFATDQIDTAFKYIDSTLKHGNTLSVNLFMKCVRSCVKQGRLDTLVAIIEKCRATDQNKALCPSWKLCIFIAEVAIRADNSKLAYYGLEFMARWIVKGERARPPVLLSVDEGLAVSALMTAGRTYNSELLGAAWAVLDRSLRKKKLPNPESYLSKIYALASLGHLQKAFGTLHDYERAYGNSDQEADDLFCPFTSLHPLAVACSKKGFETLDTVYFQLENLIHAERPYKSLAALNCIIVGSANIWDLDRAYQTYESIVSTFGLTHNIHSHNGLMYAFVKVNKTHDVSKVFGHIVSSGLKPNAKSYCLLIDAHLINRDVKSAMGVLDDMIAAGFEPMKVTLKKIRRRCIREFDTESDERLESLAQSYNYRLGSEARRNMLFNLNYSTEMA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02032 604 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 168 202 IPR002885 -
Mepo5g02032 604 Gene3D Tetratricopeptide repeat domain 101 295 IPR011990 GO:0005515
Mepo5g02032 604 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 516 550 IPR002885 -
Mepo5g02032 604 PANTHER OS07G0599000 PROTEIN 1 603 IPR044605 -
Mepo5g02032 604 Pfam Pentatricopeptide repeat domain 477 526 IPR002885 -
Mepo5g02032 604 Pfam Pentatricopeptide repeat domain 130 179 IPR002885 -
Mepo5g02032 604 NCBIfam pentatricopeptide repeat 519 550 IPR002885 -
Mepo5g02032 604 NCBIfam pentatricopeptide repeat 484 517 IPR002885 -
Mepo5g02032 604 MobiDBLite consensus disorder prediction 33 62 - -
Mepo5g02032 604 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 515 IPR002885 -
Mepo5g02032 604 MobiDBLite consensus disorder prediction 36 52 - -
Mepo5g02032 604 Gene3D Tetratricopeptide repeat domain 328 590 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02032 Mepo-Chr5 22647226 22653146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02032 345 558 Glycosyltransferase AT1G05670 21.759 6.99e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02032 - - gmx:100800731 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02032 5 22647226 22653146 Mepo5g02032 5 22647226 22653146 ECH