Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02013 ATGGAAGACAAAGACAGAGCACCTACCGAAGAGTTCGTCGCCAACTCAAACTGGACTCTCAGCGTCGATGATTCCGGCGATAGGTTCGGCCACATGGACTGGAATCTTGTACCGGAAACCACCGACGACAAACTGTTGCAACCGGTTCAAACCGGTTCTATCGAAACGGCGTCGGCGTCAGCATCGTCTTACAGGTCAAATAATCAATCAATTTCTTCAAGCTCCAGCGAGGATCTGCCGGAGAAATCCACCGTCTCCGATGAGAAGCCGCCGGAAACACCGAGTAAAAGCAAGAAGAAGGGGCAACAGCGAATACGGCAACCACGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGAGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTCCATTCCCTAGGAGCTACTATAGGTGCACAAATAGTAAATGCACGGTGAAAAAAAGGGTTGAACGCTCTCATGAGGACCCTACAATTGTTATAACTACATATGAAGGCCAACATTGTCATCACACAGTTGGATTTCCTCGAAGTGGAATCATTAGTCATGAATCTTCTTTTACTGGCCAGTTTGCTCCTACAATGCCTCAATTCTATTATCCTGTTCAATTACCTGCAGAATTAAACACTTGCACCACCACTGTTTCTCAGGCATGTCAAACACATCATCATCATGAGGCCGCTGGAGGATCGAGCAGCGCTACAATGCCAGCCGATGCATCACTGCCGCTGGATCTAGCCGATGAAGGACTACTTGGAGATATTGTACCCCGTGGAATGCGCAACAAGGATGAGAGAAATATTTGA 831 0.4693 MEDKDRAPTEEFVANSNWTLSVDDSGDRFGHMDWNLVPETTDDKLLQPVQTGSIETASASASSYRSNNQSISSSSSEDLPEKSTVSDEKPPETPSKSKKKGQQRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSHEDPTIVITTYEGQHCHHTVGFPRSGIISHESSFTGQFAPTMPQFYYPVQLPAELNTCTTTVSQACQTHHHHEAAGGSSSATMPADASLPLDLADEGLLGDIVPRGMRNKDERNI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02013 276 Gene3D WRKY domain 108 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g02013 276 ProSiteProfiles WRKY domain profile. 116 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g02013 276 SMART WRKY_cls 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g02013 276 FunFam WRKY transcription factor 57 107 181 - -
Mepo5g02013 276 SUPERFAMILY WRKY DNA-binding domain 113 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g02013 276 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 60 220 IPR044810 GO:0003700
Mepo5g02013 276 MobiDBLite consensus disorder prediction 81 99 - -
Mepo5g02013 276 MobiDBLite consensus disorder prediction 1 110 - -
Mepo5g02013 276 MobiDBLite consensus disorder prediction 44 80 - -
Mepo5g02013 276 Pfam WRKY DNA -binding domain 122 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02013 Mepo-Chr5 22438909 22449937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g02013 66 270 WRKY Transcription Factor Family AT1G69310 57.346 4.76e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo5g02013 WRKY 3.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g02013 - - gmx:100170676 331.257