Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01956 ATGGACCGACCACCGTGGAAGGAAGAAGAAGAAGCGGCGGTTGGCGGTGGTGAAGGGGGACCACCACAGCGACCCTCCTTAACTCTGCCGCCACGTACGGACGCACTTTTCACCGGTGGTTTTAGCCCTGGTCCTATGACTCTTCTCTCTAACTTATTTGCTGATGGTGATGACGGCAAATCCTTCTCTCAGCTTCTCGCCGGTTCCATGGTGTCTCCGGCAGTGGTAACCGCCGGTGGGCTTGATTCATCTGGCTTCTTTTCACATCCTCAGGTATCCTTTGGAATGCCACAGCAGCAACCACTGGCACAGATCTCGGCTCACGAAGGACAATCCAACACTAATATGCTTAACCAAGCCGAACATTCATCGTCTGTACCAGCATCCATTGATCATACTCCTCTCTCTGAACAAAGGTTGCAGCCTTCTTCGTTGAATGTTGATAAGCCTGCCGATGATGGCTACAATTGGAGGAAATATGGACAGAAACAGGTGAAAGGTAGCGAGTTTCCTCGAAGTTATTACAAGTGCTCACATCCTAACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCGCTTGCTGGTCATATAACCGCAATTATTTATAAAGGAGAGCACAATCATCAACTTCCGAATCCTAACAAGCGATCAAAAGACACTATAACTTCAAATGAAAATTCAAATATGCGAGGGAGTGCTGATTCAACTTATCAACAGGTGACTTCAAACTCAAAGTCTAAGATGGACCCTGAATCTAGTCAGGCAACAGGTGAACATCTATCTGGTACGAGTGATAGTGAGGATGTAGGTGATCGTGAAACAGAAGCGGACGAGAAAAGAATTGAGCCCGACTCCAAAAGGAGAAATACAGAAGTCACAGTCTCAAATTCAACAACTTCTTCACATAAGACTGTCACAGAGCCTAAAATCATCGTGCAAACTACCAGTGAAGTTGATCTCTTAGATGATGGTTATAGATGGCGAAAATATGGACAGAAAGTTGTCAAAGGAAATCCTTATCCTAGGAGCTATTACAAATGTACAACACCGGGTTGTAATGTTCGAAAGCATGTAGAGAGGGCCTCGACGGATCCTAAAGCAGTCATAACAACATATGAAGGAAAACATAACCATGATGTTCCAGCAGCTAAGACTAATAGCCACACTATTGCCAACAATAATGCTTCACAGTTAAAATCGCAAAATACCATTTCTGAGACTAGTTTTGGTAGCATTGGTATTGGCGGAGGCAATGAGCAACAACCTGTTGCTCGTCTAAGGCTGAAGGAAGAGCAGATAACTTAA 1302 0.4478 MDRPPWKEEEEAAVGGGEGGPPQRPSLTLPPRTDALFTGGFSPGPMTLLSNLFADGDDGKSFSQLLAGSMVSPAVVTAGGLDSSGFFSHPQVSFGMPQQQPLAQISAHEGQSNTNMLNQAEHSSSVPASIDHTPLSEQRLQPSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCSHPNCPVKKKVERSLAGHITAIIYKGEHNHQLPNPNKRSKDTITSNENSNMRGSADSTYQQVTSNSKSKMDPESSQATGEHLSGTSDSEDVGDRETEADEKRIEPDSKRRNTEVTVSNSTTSSHKTVTEPKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNTISETSFGSIGIGGGNEQQPVARLRLKEEQIT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01956 433 MobiDBLite consensus disorder prediction 289 307 - -
Mepo5g01956 433 MobiDBLite consensus disorder prediction 120 145 - -
Mepo5g01956 433 MobiDBLite consensus disorder prediction 120 157 - -
Mepo5g01956 433 Pfam WRKY DNA -binding domain 152 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 Pfam WRKY DNA -binding domain 321 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 MobiDBLite consensus disorder prediction 263 288 - -
Mepo5g01956 433 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 401 IPR044810 GO:0003700
Mepo5g01956 433 ProSiteProfiles WRKY domain profile. 152 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 SMART WRKY_cls 151 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 SMART WRKY_cls 320 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 SUPERFAMILY WRKY DNA-binding domain 149 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 Gene3D WRKY domain 140 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 Gene3D WRKY domain 305 381 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 MobiDBLite consensus disorder prediction 203 307 - -
Mepo5g01956 433 SUPERFAMILY WRKY DNA-binding domain 312 380 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 MobiDBLite consensus disorder prediction 213 262 - -
Mepo5g01956 433 FunFam WRKY transcription factor 33 307 373 - -
Mepo5g01956 433 FunFam WRKY transcription factor 139 211 - -
Mepo5g01956 433 MobiDBLite consensus disorder prediction 1 30 - -
Mepo5g01956 433 ProSiteProfiles WRKY domain profile. 315 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g01956 433 MobiDBLite consensus disorder prediction 408 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01956 Mepo-Chr5 21702640 21707207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01956 24 433 WRKY Transcription Factor Family AT2G03340 50.482 2.45e-146 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo5g01956 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01956 - - gmx:100127369 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01956 5 21702640 21707207 Mepo5g01956 5 21702640 21707207 ECH