Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01946 ATGATGAATGGAAGAAACAGGTATCCTTTTACTCCAACTCAGTGGCAAGAGCTTAAACATCAAGCTCTTATCTACAAATACATGGCTTCTAGTATTCCCATTCCTCCTGATCTTCTACTCACTATCAAAAGAAGCTACTTAGACTCTTCAAGGCTCTCACCTCATCAGTCTCAACATTGGAGGTGTAGAAGAGCAGATGGAAAGAAATGGAGGTGTTCAAAAGAAGCATATTCGGATTCAAAGTACTGTCAAAGGCACATGCATAGAGGGAAAAACCGTTCAAGAAAGCCCGTGGAAGTTTTGAAAACAACAACAAACACAAACACTCCTGCTGCTACTTCAACGATCTTATCAATCACTAAAAATAGTAGTCTTGATTCTGATCATAACACTGCAACACTAACATCAACAACTCATGACACTAATTACCATTACCCTCAACAAGCTTCTTATGCTTCTTCCCATCTTAACCACCCTTTCCTCTACCATAACCCTCCATCCTCAAGGCCTAAATTCTCATTTCAAGACAACAGTGCTCCCTTGTTTCTTGACAGTAATGGTTCTTCCTCTCACAATAACAACAACACTGATTGA 594 0.3973 MMNGRNRYPFTPTQWQELKHQALIYKYMASSIPIPPDLLLTIKRSYLDSSRLSPHQSQHWRCRRADGKKWRCSKEAYSDSKYCQRHMHRGKNRSRKPVEVLKTTTNTNTPAATSTILSITKNSSLDSDHNTATLTSTTHDTNYHYPQQASYASSHLNHPFLYHNPPSSRPKFSFQDNSAPLFLDSNGSSSHNNNNTD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01946 197 PANTHER GROWTH-REGULATING FACTOR 5 8 176 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mepo5g01946 197 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo5g01946 197 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo5g01946 197 MobiDBLite consensus disorder prediction 161 197 - -
Mepo5g01946 197 ProSiteProfiles WRC domain profile. 56 100 IPR014977 -
Mepo5g01946 197 Pfam WRC 58 99 IPR014977 -
Mepo5g01946 197 MobiDBLite consensus disorder prediction 168 197 - -
Mepo5g01946 197 Coils Coil 193 197 - -
Mepo5g01946 197 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01946 Mepo-Chr5 21604740 21605501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01946 6 99 GRF Transcription Factor Family AT3G13960 58.407 4.14e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mepo5g01946 WRC 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01946 - - cam:101508073 254.988