Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01941 ATGGAACAACAAACACAAGAAAACTCAACCAACAAAAACACTAACCAAAATCTCACAAACAAAACAACCACTTTCATCACAAAAAATGGAACAAACTCTCATCAACATCATCATTACTATCATCAACAGCAACACCACCACCAACAACAACAACAGTATCAGAATCATCTTCAACAATACCAAACTCAACTCGGTTTCTACAACAACTACCAACATAAGTATCAAAGATATTACCCTGCTCTTCTTCCTTTACCTTCACTTCAACAACTACCTTTGATTCCATCTTTCCCTCAAAATCTCAAAACCCATTTGCACAAACTTCCATGCAAACTCAATACTTCTCCTTCATCAGAATACAATCTTTCTCAACTTTCACTTGATCCTGCTCCAAAGGAACTTCAGAAGCAAACTAGACCATCCTTTAAAGAAGTTGATGGGAAGAAGCTTATTTCAACAAGGAAGCCACATGAAGTAATTGTTGCAAGGAGACCAGATTCTGGTGGACAAGAAGGTCCTGTGATTTCTCTCCTTGCCAACCATTTTTTGGTGAAATTTGATTCATCACAAAAAATATATCATTACAATGTTGAGATTACTCCTCATCCCTCTAAGGATGTTGCTAGAGAAATCAAGCATAAATTGGTAAATAACAATGCTGAGATTTTATCGGGCGCTTTGCCGGCATATGACGGGAGGAAAAATCTTTATAGTCCAATTGAATTCCAAAATGATAAGCTTGAGTTCTACATAAGCCTCCCAATCCCAACTAGCAAATCGACATCACCTTGTGAGAAACGTGAACAACATAAACTTTTTCGGATAAATATCAAATTAGTCTCGAAGATTGACGGGAAGGGGTTGACTAACTACTTGAGCAAAGAAGGTGACGAAGGGATTCCGCTTCCGCAGGATTATCTACATGCTTTGGATGTAGTCTTGAGGGAAAGTCCGACTGAGAAATGTATACCTGTTGGAAGGTCATTCTATTCGAGTTCAATGGGGAGAAGCAAAGATATCGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCTCTCAATGTGGATTTCTCGGTAACTGCTTTCCACGAGAGTATAGGAGTTATTCCGTATTTGCAGAAACGTCTCGAGTTTCTTAGAGATCTTTCTCAAAGGCAGACAACTCAGCTAACCTGTGAAGAAAGGAAGGAAGTAGAGAAAACGTTGAAGAACATCAGAGTCTTTGTTTGCCATAGAGAAACTGTTCAGAGATACCGTGTCTATGGCTTAACTGAGGAGACAACTGAAAATCTTTGGTTTCCTGATAGAGATGGAAAGAATCTGAGGCTTATGAGTTACTTTAAAGATCACTATAACTACGACATTCAATTCAGGAAGTGGCCATGCTTGCAAATTAGTAGGAGTAAACCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGACAGAAGTTCCTTGGGAAACTGTCGGATGATCAGACGGCAAAAATACTCAAGATGGGCTGTCAAAGACCGGGAGAACGAAAAGCCATCATCGAAGGCGTCATGAGAGGAAATGTTGGTCCTACCAGTGGTGACCAGGAAAATGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGGAGAATTCTTTACCCTCCAAAACTAAAGCTTGGAGATGGAGGTCATGTGAGAAACCTGACTCCTTCACGTCACGATCGCCAGTGGAACTTTCTAGATGGCCACGTCTTTGAAGGAACTACAATTGAAAGGTGGGCACTAATAAGTTTTGGAGGCACACCTGAGCAAAAGTCTCATATCCCAAGATTCATAAACCAGTTAACTCAAAGATGTGAACAATTAGGTATTTTTCTCAACAAGAACACAATTATTAGTCCACAGTTTGAATCAATCCAAGTTCTTAACAATGTCACAATTTTGGAATCTAAGCTCAAAAGAATCCAGAGTATTGCCTCAAACAATCTACAGCTTCTTATTTGTATAATGGAGAAAAAACACAAAGGGTATGCAGATTTGAAACGAATTGCCGAGACAAGTGTTGGTGTTGTAAGCCAGTGCTGCTTGTATCCGAATCTCATCAAATTAAGTTCACAGTTTTTGGCTAATTTGGCTCTCAAGATCAATGCCAAAGTTGGTGGATGCACTGTTGCTTTGTACAACTCGCTTCCTTCTCAATTACCGCGTCTTTTCAACATTGACGAGCCGGTGATGTTCATGGGAGCTGACGTCACGCATCCTCATCCTCTCGACGATTCAAGTCCATCTGTCGCTGCTGTTGTTGGTAGCATGAACTGGCCAACAGCAAACAGATATATTTCAAGAATAAGGTCTCAAACACACAGGCAAGAAATTATTGCAGATCTCGGTGCAATGGTTGGAGAATTGCTTGAAGATTTTTATCAAGAAGTGGAAAAACTCCCAAACCGAATAATTTTCTTCCGAGACGGTGTTAGCGAAACTCAGTTTTACAAAGTGCTGCAAGAGGAACTACAATCAATAAAACAAGCATGTTCAACAAGGTTCCATGGTTATAAACCTTTTATTACCTTTGTAGTTGTGCAAAAGAGGCATCACACAAGGTTGTTTCCTGCTGACACCGATCAATCTTCGACACACAACAATTTTCACTTTCAATATGAAAATATTCCACCAGGGACTGTGGTTGATTCTGTGATTACTCATCCAAAGGAATTTGATTTCTATCTATGTAGTCATTGGGGTGTGAAGGGAACAAGTCGGCCAACTCATTACCATGTCTTGTGGGATGAAAATAAGTTTACTTCAGATGAACTGCAAAAGCTTGTTTACAATTTGTGTTTTACTTTTGTTAGGTGTACTAAGCCAATTTCATTAGTTCCTCCTGCATATTATGCACATTTAGCTGCCTATAGAGGTAGACTCTACCTTGAGAGATCAGAGTCTTTAGGTTTGTTCAGAAGTGCTTCTACATTATCAAGAGCTGCTACGCCGAAGACACCACCTCTACCTAAACTTAGTGAAAACATCAAGAAGCTTATGTTTTACTGCTAG 3069 0.3985 MEQQTQENSTNKNTNQNLTNKTTTFITKNGTNSHQHHHYYHQQQHHHQQQQQYQNHLQQYQTQLGFYNNYQHKYQRYYPALLPLPSLQQLPLIPSFPQNLKTHLHKLPCKLNTSPSSEYNLSQLSLDPAPKELQKQTRPSFKEVDGKKLISTRKPHEVIVARRPDSGGQEGPVISLLANHFLVKFDSSQKIYHYNVEITPHPSKDVAREIKHKLVNNNAEILSGALPAYDGRKNLYSPIEFQNDKLEFYISLPIPTSKSTSPCEKREQHKLFRINIKLVSKIDGKGLTNYLSKEGDEGIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRQTTQLTCEERKEVEKTLKNIRVFVCHRETVQRYRVYGLTEETTENLWFPDRDGKNLRLMSYFKDHYNYDIQFRKWPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPGERKAIIEGVMRGNVGPTSGDQENEFKLQVSREMTKLTGRILYPPKLKLGDGGHVRNLTPSRHDRQWNFLDGHVFEGTTIERWALISFGGTPEQKSHIPRFINQLTQRCEQLGIFLNKNTIISPQFESIQVLNNVTILESKLKRIQSIASNNLQLLICIMEKKHKGYADLKRIAETSVGVVSQCCLYPNLIKLSSQFLANLALKINAKVGGCTVALYNSLPSQLPRLFNIDEPVMFMGADVTHPHPLDDSSPSVAAVVGSMNWPTANRYISRIRSQTHRQEIIADLGAMVGELLEDFYQEVEKLPNRIIFFRDGVSETQFYKVLQEELQSIKQACSTRFHGYKPFITFVVVQKRHHTRLFPADTDQSSTHNNFHFQYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENKFTSDELQKLVYNLCFTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSASTLSRAATPKTPPLPKLSENIKKLMFYC 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01941 1022 CDD Piwi_ago-like 539 982 IPR045246 -
Mepo5g01941 1022 SMART DUF1785_2 322 374 IPR014811 -
Mepo5g01941 1022 SMART Piwi_a_2 670 983 IPR003165 GO:0003676
Mepo5g01941 1022 MobiDBLite consensus disorder prediction 1 20 - -
Mepo5g01941 1022 Coils Coil 1 21 - -
Mepo5g01941 1022 Pfam Piwi domain 671 980 IPR003165 GO:0003676
Mepo5g01941 1022 ProSiteProfiles Piwi domain profile. 670 983 IPR003165 GO:0003676
Mepo5g01941 1022 Pfam N-terminal domain of argonaute 174 313 IPR032474 -
Mepo5g01941 1022 Pfam PAZ domain 385 507 IPR003100 GO:0005515
Mepo5g01941 1022 Gene3D - 556 732 - -
Mepo5g01941 1022 FunFam Protein argonaute 7 369 495 - -
Mepo5g01941 1022 Gene3D - 742 1022 IPR036397 GO:0003676
Mepo5g01941 1022 ProSiteProfiles PAZ domain profile. 382 491 IPR003100 GO:0005515
Mepo5g01941 1022 SUPERFAMILY Ribonuclease H-like 655 983 IPR012337 -
Mepo5g01941 1022 MobiDBLite consensus disorder prediction 25 55 - -
Mepo5g01941 1022 FunFam Argonaute 10 556 732 - -
Mepo5g01941 1022 CDD PAZ_argonaute_like 385 490 - -
Mepo5g01941 1022 FunFam protein argonaute 10-like 741 1022 - -
Mepo5g01941 1022 Pfam Argonaute linker 1 domain 323 372 IPR014811 -
Mepo5g01941 1022 SUPERFAMILY PAZ domain 369 527 IPR036085 GO:0005515
Mepo5g01941 1022 Gene3D paz domain 368 495 - -
Mepo5g01941 1022 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 157 985 - -
Mepo5g01941 1022 SMART PAZ_2_a_3 382 522 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01941 Mepo-Chr5 21527985 21532361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01941 168 1022 Eukaryotic Initiation Factors Gene Family AT1G48410 41.611 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01941 K11593 - gmx:100797755 1700.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01941 5 21527985 21532361 Mepo5g01941 5 21527985 21532361 ECH