Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01930 ATGGCTCCAAGATCAGATAACATATCTGAGATCAGTCCGGTGAAGGAATCTTGGAGCATAGTTGTACGGATTGTCCGTGCTTGGTTTGTTCATGTCATGGGTATGTTGACCGGTGTTGGTACGCAAAGGGAATATGAACGAAATGGAGCCAAAACTAAGATGGTGGCCATGGAATTGGATTACGATGGGTTTAAATTTAAGGTCACTCTATTTGGACAATATGTTGAGGAACTTAATGCTTTTGTTGTTGTCGGGGAGACCGATAAGGTCATTGTGGTTGTCCTGCTGGCCAAAGTTAAGATCTGGCAAGGAGCTGCTACTGTCCAGAACACAATCTACTCTACTAAGCTGATTTTTAACCCTGATTTGATTGCTGCTCATGATCTAAAGAAAAGGATGGTTGGGAAGAACGGTGTTCCCTCTCCTGGAATAACTTTCCTTCAGGATCCGTCGAGGATTACCGAAGAGGAGGATTTCCTTAAGATCACTGCGAGGAAGACTGTCGAGGACTTGAAGGAGTGTACCATGGAGTCTTGCTTTGTTGTGAAGGCTACGGTAAAATTTGTTATCGATACGGATGAGTGGTGGTACACTGCATGTGTTTCTAACAAGAAAGTAGTGCCAGATGAGAAAATGTACTTCTGCGCCAAGTGTAATAAGCATGTTATGCATGTTTCTCCTAGGTGCTCTGATGAGAGCGGAACGTTGCCTAAAGAAATTAGCTCCTTGGTTGATTCCACCTTTCTGTTTAAGGTGGAAACTAACATAAGCACCGATGCAAGGTTTGAAAAATCTTATCGGGAGGCTACAGTGGTTGAAGGCTCTTTTGAAGCGATTGAAAATGCTGATAATGATTCCTCTGTCAATGAGAACCTGCTCAAGAAGTTTGGTGATTCGGAAGTGGTTGGGAGTAAGGATGTTGATGCTAAAAAGACTGTTGATCTTACCAATGATGAGGTTGATGTGACTCCTGCGAAGCGTTCATGCCCATTTGATGGTGAAGGCAGCGGTGGCAATGGACCGGTCAAACAATGTTTAAAGGTGAAGTTTCCCCCAAATTTTACCACAAAAGTTAAATGTTCTTCGTTCTTTACCGTGCATGTACAGAATCAGGATGTCGGAGAACTACAACCATTCTTCGTTGCTCAATATTTCTACGAGGTACCGGAGCAATGGCACTTGCTAGATGGTGATGGGAACACTCATAATGTCATGTTCAACAAATCAGTTAGTCGGCCGTTGTTGACAGATGGTTGGAGTGCATTGAGATTATTCTACGAGTTTAGTGAAATAGTGGAAGTTCCTATCGCTGGATATGGATCGACGAAATCACCAATGGAACTACCTGATACTTTTGGCAAATTCCTTAGAGTGAAACATCACGATTACGTCATGTTATGCGGACCTTATGACAATATCATTCCTATGAGACTCAAATATACAGACGACCCCATACCAAATGGTGCTACAATTTATTGTACTGTCGACAAAGATCTTGTTCAGAAATACGATAATATGGTTAAAGAGGACCGTGTTTATGTGATGATTAATTTTATTGTATCTCACGACAATTCCAAGATTAAGACATCGTGCCACAATTTTAAGCTGGAATTTGTTGAAAGAACCCGGATTAGACCGGTCGATGAGTCTTTGGTCCCCATTGATGCGTACGTGTTCAATGGGCCCACTGAGTTCCTCGGCCTTTGTCATCAAGATGAGATTATGATTGGCATCCCTACAGTCCACACCACTGAATATGCTACCAAAGTGGTCTTCAATCCCGTCATGAATGCTGCAGTGGAATTGAAAAGGAGGATGGCGTGCCAGAAGTACTTTCCTTCAAGGTCGCTTGCTTTGTCGCTGAAGACAAAGAGAATGGTCGAAATAGACAATTGGCTTTCGGCTGCGTATGTCCGTACTATTTTGGATTTGGTTCACTTTGAGGAGGATCGTGTGTACGTTGTTTTTGGAACGGTCGAACTTATTGATGGTTTTTCTGATTGGTGGTTCCAGATAGACGTTTGGGTCATTGACGAGACTGGCAGTGTGTCTTTTACTTTGTTTGATCGTGTTGCTGTAGAATTGTTTGGAAAGTCCTGTGAGGATGTCATCCAGGCCAATGGTTTGAATCATGTTGCTTCACCTGTACCTGGAGAAATTGCTGCACTGAGTGGGAAAAGTTTTCTTTTCAAAGTGATCCCCAGGCTGTTCTCAATGATTCTGGAGGATAATTCAATTGAAAGCAAAAACAATAGAAAGTCAAATCAATAA 2271 0.4245 MAPRSDNISEISPVKESWSIVVRIVRAWFVHVMGMLTGVGTQREYERNGAKTKMVAMELDYDGFKFKVTLFGQYVEELNAFVVVGETDKVIVVVLLAKVKIWQGAATVQNTIYSTKLIFNPDLIAAHDLKKRMVGKNGVPSPGITFLQDPSRITEEEDFLKITARKTVEDLKECTMESCFVVKATVKFVIDTDEWWYTACVSNKKVVPDEKMYFCAKCNKHVMHVSPRCSDESGTLPKEISSLVDSTFLFKVETNISTDARFEKSYREATVVEGSFEAIENADNDSSVNENLLKKFGDSEVVGSKDVDAKKTVDLTNDEVDVTPAKRSCPFDGEGSGGNGPVKQCLKVKFPPNFTTKVKCSSFFTVHVQNQDVGELQPFFVAQYFYEVPEQWHLLDGDGNTHNVMFNKSVSRPLLTDGWSALRLFYEFSEIVEVPIAGYGSTKSPMELPDTFGKFLRVKHHDYVMLCGPYDNIIPMRLKYTDDPIPNGATIYCTVDKDLVQKYDNMVKEDRVYVMINFIVSHDNSKIKTSCHNFKLEFVERTRIRPVDESLVPIDAYVFNGPTEFLGLCHQDEIMIGIPTVHTTEYATKVVFNPVMNAAVELKRRMACQKYFPSRSLALSLKTKRMVEIDNWLSAAYVRTILDLVHFEEDRVYVVFGTVELIDGFSDWWFQIDVWVIDETGSVSFTLFDRVAVELFGKSCEDVIQANGLNHVASPVPGEIAALSGKSFLFKVIPRLFSMILEDNSIESKNNRKSNQ 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01930 756 SUPERFAMILY Nucleic acid-binding proteins 27 132 IPR012340 -
Mepo5g01930 756 Gene3D - 643 745 IPR012340 -
Mepo5g01930 756 Gene3D - 154 230 IPR012340 -
Mepo5g01930 756 SUPERFAMILY Nucleic acid-binding proteins 668 734 IPR012340 -
Mepo5g01930 756 CDD RPA1_DBD_A_like 491 544 - -
Mepo5g01930 756 Pfam Domain of unknown function DUF223 487 548 IPR003871 -
Mepo5g01930 756 CDD RPA1_DBD_B_like 32 133 - -
Mepo5g01930 756 SUPERFAMILY Nucleic acid-binding proteins 487 549 IPR012340 -
Mepo5g01930 756 SUPERFAMILY Nucleic acid-binding proteins 164 237 IPR012340 -
Mepo5g01930 756 Gene3D - 472 549 IPR012340 -
Mepo5g01930 756 Gene3D - 7 138 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01930 Mepo-Chr5 21372581 21382420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01930 29 221 Core DNA Replication Machinery Family AT2G06510 27.962 1.74e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01930 - - mtr:25497071 370.548