Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01922 ATGGAAAGTAGAACATGCTCTGAACTCCCACCTGGTTTTAGGTTTCATCCAACCGATGAGGAGCTAATTGTGTATTACCTTTGTAATCAAGCAACATCACAACCATGTCCTGCATCTATCATTCCAGAAGTTGATATCTATAAATTTGATCCATGGGAATTACCAGATAAATCAGACTTTGGAGAAAATGAATGGTATTTTTTTACTCCAAGAGAAAGAAAGTATCCAAATGGGGTGAGACCAAATAGAGCAACTGTTTCTGGTTATTGGAAAGCCACTGGAACAGACAAATCAATCTTTAGTGGGTCTAAGCATATTGGAGTTAAGAAAGCTTTGGTATTTTACAAGGGTAGACCACCAAAGGGAATCAAGACAGATTGGATTATGCATGAATATAGATTAATTGGATCAAGAAGACAAGCTAATAGACAAATTGGGTCCATGAGGCTAGATGATTGGGTCTTATGTAGGATCTATAAGAAGAAGAACATCACAAAATCATTGGAGACAAATGAAGACTACCCAACAAACCAAATCAATATGACACAAACAAATGATCTTAATGAACAAGAATTGGTGAAATTTCCAAGGACATGTTCTCTTACTAATCTTTTGGATATGGATTATATGGGACCAATATCACAAATATTATCAGATGGATCATATAATTCAACCTTTGAATTTCAAATTAATACTGCACATGGTGGAACAATAGACCCCACTTATGCAGCTGGTTTAGAGAAGTACAATGTGAAACAAAATAGCAGCTTTGGGAACCAAGTATTTGATCAAAGGGAATAA 801 0.3558 MESRTCSELPPGFRFHPTDEELIVYYLCNQATSQPCPASIIPEVDIYKFDPWELPDKSDFGENEWYFFTPRERKYPNGVRPNRATVSGYWKATGTDKSIFSGSKHIGVKKALVFYKGRPPKGIKTDWIMHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNITKSLETNEDYPTNQINMTQTNDLNEQELVKFPRTCSLTNLLDMDYMGPISQILSDGSYNSTFEFQINTAHGGTIDPTYAAGLEKYNVKQNSSFGNQVFDQRE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01922 266 FunFam NAC transcription factor 18 165 - -
Mepo5g01922 266 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Mepo5g01922 266 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Mepo5g01922 266 PANTHER NAC TRANSCRIPTION FACTOR 56 9 180 - -
Mepo5g01922 266 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Mepo5g01922 266 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01922 Mepo-Chr5 21263292 21264924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01922 1 216 NAC Transcription Factor Family AT1G69490 66.667 1.57e-113 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo5g01922 NAM 3.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01922 - - gmx:732552 455.292